Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
ZC3H4Q9UPT8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21.72■■□□□ 1.07
ZC3H4Q9UPT8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC21.72■■□□□ 1.07
ZC3H4Q9UPT8 SPDYE21P-201ENST00000413323 827 ntBASIC21.72■■□□□ 1.07
ZC3H4Q9UPT8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZC3H4Q9UPT8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC21.72■■□□□ 1.07
ZC3H4Q9UPT8 IGHV3-65-201ENST00000523210 341 ntBASIC21.72■■□□□ 1.07
ZC3H4Q9UPT8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
ZC3H4Q9UPT8 AC025678.2-201ENST00000562061 970 ntBASIC21.72■■□□□ 1.07
ZC3H4Q9UPT8 AC004449.1-201ENST00000564240 433 ntBASIC21.72■■□□□ 1.07
ZC3H4Q9UPT8 AC005498.2-205ENST00000593218 784 ntBASIC21.72■■□□□ 1.07
ZC3H4Q9UPT8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.72■■□□□ 1.07
ZC3H4Q9UPT8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.72■■□□□ 1.07
ZC3H4Q9UPT8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZC3H4Q9UPT8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZC3H4Q9UPT8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZC3H4Q9UPT8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZC3H4Q9UPT8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ZC3H4Q9UPT8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZC3H4Q9UPT8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZC3H4Q9UPT8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.71■■□□□ 1.07
ZC3H4Q9UPT8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
ZC3H4Q9UPT8 MTMR9LP-203ENST00000426597 1545 ntBASIC21.71■■□□□ 1.07
ZC3H4Q9UPT8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZC3H4Q9UPT8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZC3H4Q9UPT8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZC3H4Q9UPT8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ZC3H4Q9UPT8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZC3H4Q9UPT8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZC3H4Q9UPT8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
ZC3H4Q9UPT8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ZC3H4Q9UPT8 ELK2BP-201ENST00000415014 1224 ntBASIC21.71■■□□□ 1.07
ZC3H4Q9UPT8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.71■■□□□ 1.07
ZC3H4Q9UPT8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
ZC3H4Q9UPT8 AC112698.1-201ENST00000510299 916 ntBASIC21.71■■□□□ 1.07
ZC3H4Q9UPT8 AC008667.4-201ENST00000607370 168 ntBASIC21.71■■□□□ 1.07
ZC3H4Q9UPT8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ZC3H4Q9UPT8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZC3H4Q9UPT8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZC3H4Q9UPT8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZC3H4Q9UPT8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZC3H4Q9UPT8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZC3H4Q9UPT8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZC3H4Q9UPT8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ZC3H4Q9UPT8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ZC3H4Q9UPT8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.7■■□□□ 1.06
ZC3H4Q9UPT8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZC3H4Q9UPT8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZC3H4Q9UPT8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ZC3H4Q9UPT8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZC3H4Q9UPT8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZC3H4Q9UPT8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 AC007967.3-201ENST00000434308 558 ntBASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 AC015911.4-201ENST00000588022 1070 ntBASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 AC012645.4-201ENST00000610691 1061 ntBASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 AD001527.2-201ENST00000622994 785 ntBASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.69■■□□□ 1.06
ZC3H4Q9UPT8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 AC112907.3-201ENST00000577781 2400 ntBASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 KRT8P47-201ENST00000604727 1398 ntBASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 LINC00602-201ENST00000629776 2065 ntBASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 RNA5SP421-201ENST00000516864 134 ntBASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.68■■□□□ 1.06
ZC3H4Q9UPT8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms