Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 AC133963.1-201ENST00000504166 1679 ntBASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 AC099398.1-201ENST00000567919 2776 ntBASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB1Q9H4B7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 ECEL1P2-202ENST00000465689 757 ntBASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 AP001094.4-201ENST00000579008 2176 ntBASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TUBB1Q9H4B7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 AL023806.1-201ENST00000603994 1649 ntBASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 LINC00304-203ENST00000565008 1864 ntBASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 AC022211.2-201ENST00000585075 2527 ntBASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 AC128688.1-201ENST00000487626 519 ntBASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 LINC00602-201ENST00000629776 2065 ntBASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBB1Q9H4B7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms