Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 HTR7P1-202ENST00000624664 4411 ntBASIC16.73■□□□□ 0.27
UBQLN3Q9H347 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 SLC25A6P5-201ENST00000435663 894 ntBASIC16.72■□□□□ 0.27
UBQLN3Q9H347 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 AC134043.2-201ENST00000624206 2238 ntBASIC16.72■□□□□ 0.27
UBQLN3Q9H347 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBQLN3Q9H347 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.71■□□□□ 0.27
UBQLN3Q9H347 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBQLN3Q9H347 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
UBQLN3Q9H347 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 GNAS-203ENST00000306120 1878 ntBASIC16.7■□□□□ 0.26
UBQLN3Q9H347 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBQLN3Q9H347 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms