Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.87■■□□□ 1.09
RPAP1Q9BWH6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 AC113404.2-201ENST00000507884 177 ntBASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 AC124864.1-201ENST00000623408 392 ntBASIC21.86■■□□□ 1.09
RPAP1Q9BWH6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 AL024508.2-201ENST00000607749 1894 ntBASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 AC099343.3-201ENST00000605834 2503 ntBASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 AC023511.2-201ENST00000618803 211 ntBASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 AC008764.6-201ENST00000595909 2069 ntBASIC21.85■■□□□ 1.09
RPAP1Q9BWH6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 MRPL3P1-201ENST00000400109 1033 ntBASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 AC091607.1-201ENST00000490318 1060 ntBASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPAP1Q9BWH6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RPAP1Q9BWH6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
RPAP1Q9BWH6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RPAP1Q9BWH6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RPAP1Q9BWH6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RPAP1Q9BWH6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.83■■□□□ 1.08
RPAP1Q9BWH6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.83■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms