Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 RPS15P9-201ENST00000494093 319 ntBASIC19.25■□□□□ 0.67
HERVK_113Q902F9 AP000344.2-201ENST00000512987 629 ntBASIC19.25■□□□□ 0.67
HERVK_113Q902F9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.25■□□□□ 0.67
HERVK_113Q902F9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERVK_113Q902F9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERVK_113Q902F9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERVK_113Q902F9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERVK_113Q902F9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.25■□□□□ 0.67
HERVK_113Q902F9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERVK_113Q902F9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HERVK_113Q902F9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERVK_113Q902F9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.24■□□□□ 0.67
HERVK_113Q902F9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERVK_113Q902F9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
HERVK_113Q902F9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.24■□□□□ 0.67
HERVK_113Q902F9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERVK_113Q902F9 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERVK_113Q902F9 AL139400.1-201ENST00000366220 510 ntBASIC19.24■□□□□ 0.67
HERVK_113Q902F9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERVK_113Q902F9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
HERVK_113Q902F9 AL020989.1-201ENST00000422979 469 ntBASIC19.24■□□□□ 0.67
HERVK_113Q902F9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERVK_113Q902F9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.24■□□□□ 0.67
HERVK_113Q902F9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.24■□□□□ 0.67
HERVK_113Q902F9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
HERVK_113Q902F9 PDPK2P-202ENST00000562415 1191 ntBASIC19.24■□□□□ 0.67
HERVK_113Q902F9 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.24■□□□□ 0.67
HERVK_113Q902F9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.24■□□□□ 0.67
HERVK_113Q902F9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERVK_113Q902F9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERVK_113Q902F9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERVK_113Q902F9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERVK_113Q902F9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HERVK_113Q902F9 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 ACTG1P14-201ENST00000446382 1122 ntBASIC19.23■□□□□ 0.67
HERVK_113Q902F9 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HERVK_113Q902F9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 IGLL3P-201ENST00000412472 434 ntBASIC19.22■□□□□ 0.67
HERVK_113Q902F9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HERVK_113Q902F9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
HERVK_113Q902F9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms