Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS3Q8IXF0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS3Q8IXF0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS3Q8IXF0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.61■□□□□ 0.57
NPAS3Q8IXF0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NPAS3Q8IXF0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.61■□□□□ 0.57
NPAS3Q8IXF0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NPAS3Q8IXF0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 AC007967.3-201ENST00000434308 558 ntBASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 AP000974.1-201ENST00000623909 2387 ntBASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 AC132938.6-201ENST00000623828 1655 ntBASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS3Q8IXF0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 AP002414.3-201ENST00000589352 1468 ntBASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 KRT18P3-201ENST00000451602 1288 ntBASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS3Q8IXF0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS3Q8IXF0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.58■□□□□ 0.57
NPAS3Q8IXF0 ANO7L1-203ENST00000602586 1720 ntBASIC18.58■□□□□ 0.57
NPAS3Q8IXF0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS3Q8IXF0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
NPAS3Q8IXF0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS3Q8IXF0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS3Q8IXF0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS3Q8IXF0 LAGE3P1-201ENST00000425356 484 ntBASIC18.58■□□□□ 0.56
NPAS3Q8IXF0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.58■□□□□ 0.56
NPAS3Q8IXF0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.58■□□□□ 0.56
NPAS3Q8IXF0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.58■□□□□ 0.56
NPAS3Q8IXF0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.58■□□□□ 0.56
NPAS3Q8IXF0 AL691403.2-201ENST00000618460 490 ntBASIC18.58■□□□□ 0.56
NPAS3Q8IXF0 AC055717.3-201ENST00000622967 595 ntBASIC18.58■□□□□ 0.56
NPAS3Q8IXF0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.58■□□□□ 0.56
NPAS3Q8IXF0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
NPAS3Q8IXF0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS3Q8IXF0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS3Q8IXF0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
NPAS3Q8IXF0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NPAS3Q8IXF0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NPAS3Q8IXF0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS3Q8IXF0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS3Q8IXF0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.57■□□□□ 0.56
NPAS3Q8IXF0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.57■□□□□ 0.56
NPAS3Q8IXF0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS3Q8IXF0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.57■□□□□ 0.56
NPAS3Q8IXF0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.57■□□□□ 0.56
NPAS3Q8IXF0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NPAS3Q8IXF0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
NPAS3Q8IXF0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS3Q8IXF0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS3Q8IXF0 AC097374.2-201ENST00000618617 1306 ntBASIC18.57■□□□□ 0.56
NPAS3Q8IXF0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS3Q8IXF0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms