Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 ECEL1P2-202ENST00000465689 757 ntBASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF111Q6ZNA4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 CICP6-201ENST00000457191 2729 ntBASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 INGX-201ENST00000359239 846 ntBASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 AC008622.2-201ENST00000617006 1229 ntBASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 AC097493.4-201ENST00000641197 219 ntBASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF111Q6ZNA4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF111Q6ZNA4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
RNF111Q6ZNA4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.52■□□□□ 0.39
RNF111Q6ZNA4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF111Q6ZNA4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF111Q6ZNA4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RNF111Q6ZNA4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 ECEL1P3-201ENST00000427961 737 ntBASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 AC012306.2-201ENST00000609350 630 ntBASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF111Q6ZNA4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF111Q6ZNA4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms