Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXR1Q6PIV2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXR1Q6PIV2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.83■□□□□ 0.6
FOXR1Q6PIV2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXR1Q6PIV2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXR1Q6PIV2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FOXR1Q6PIV2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 AC073508.3-201ENST00000619697 1419 ntBASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
FOXR1Q6PIV2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 AC068418.2-201ENST00000577309 3703 ntBASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 AL356309.3-201ENST00000624132 1934 ntBASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 AC097488.1-201ENST00000507834 756 ntBASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 WWOX-216ENST00000569818 525 ntBASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
FOXR1Q6PIV2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 AC103702.1-201ENST00000548801 2630 ntBASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 SLC25A1P4-201ENST00000567977 778 ntBASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 C1QL1P1-201ENST00000568105 661 ntBASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 AL499627.1-201ENST00000569373 2188 ntBASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FOXR1Q6PIV2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms