Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
HMGXB3Q12766 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
HMGXB3Q12766 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC31.47■■■□□ 2.63
HMGXB3Q12766 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC31.47■■■□□ 2.63
HMGXB3Q12766 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
HMGXB3Q12766 AL032819.2-201ENST00000624543 2162 ntBASIC31.46■■■□□ 2.63
HMGXB3Q12766 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
HMGXB3Q12766 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
HMGXB3Q12766 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC31.46■■■□□ 2.63
HMGXB3Q12766 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
HMGXB3Q12766 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
HMGXB3Q12766 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC31.46■■■□□ 2.63
HMGXB3Q12766 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC31.46■■■□□ 2.63
HMGXB3Q12766 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
HMGXB3Q12766 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC31.46■■■□□ 2.63
HMGXB3Q12766 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
HMGXB3Q12766 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC31.46■■■□□ 2.63
HMGXB3Q12766 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC31.46■■■□□ 2.63
HMGXB3Q12766 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC31.46■■■□□ 2.63
HMGXB3Q12766 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC31.46■■■□□ 2.63
HMGXB3Q12766 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC31.46■■■□□ 2.63
HMGXB3Q12766 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
HMGXB3Q12766 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC31.46■■■□□ 2.63
HMGXB3Q12766 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
HMGXB3Q12766 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
HMGXB3Q12766 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC31.46■■■□□ 2.63
HMGXB3Q12766 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
HMGXB3Q12766 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
HMGXB3Q12766 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
HMGXB3Q12766 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
HMGXB3Q12766 COX5BP2-201ENST00000392354 334 ntBASIC31.45■■■□□ 2.63
HMGXB3Q12766 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
HMGXB3Q12766 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
HMGXB3Q12766 AC023141.13-201ENST00000604991 943 ntBASIC31.45■■■□□ 2.63
HMGXB3Q12766 REXO1L3P-201ENST00000622202 1288 ntBASIC31.45■■■□□ 2.63
HMGXB3Q12766 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC31.45■■■□□ 2.63
HMGXB3Q12766 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC31.45■■■□□ 2.63
HMGXB3Q12766 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
HMGXB3Q12766 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC31.45■■■□□ 2.62
HMGXB3Q12766 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
HMGXB3Q12766 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC31.45■■■□□ 2.62
HMGXB3Q12766 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
HMGXB3Q12766 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
HMGXB3Q12766 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC31.44■■■□□ 2.62
HMGXB3Q12766 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
HMGXB3Q12766 AC051619.7-201ENST00000568314 623 ntBASIC31.44■■■□□ 2.62
HMGXB3Q12766 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
HMGXB3Q12766 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
HMGXB3Q12766 GGTLC5P-201ENST00000617623 998 ntBASIC31.44■■■□□ 2.62
HMGXB3Q12766 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC31.44■■■□□ 2.62
HMGXB3Q12766 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
HMGXB3Q12766 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
HMGXB3Q12766 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC31.44■■■□□ 2.62
HMGXB3Q12766 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
HMGXB3Q12766 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC31.44■■■□□ 2.62
HMGXB3Q12766 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
HMGXB3Q12766 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
HMGXB3Q12766 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
HMGXB3Q12766 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
HMGXB3Q12766 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC31.44■■■□□ 2.62
HMGXB3Q12766 MED16-214ENST00000617672 554 ntTSL 5 BASIC31.44■■■□□ 2.62
HMGXB3Q12766 AC093010.1-201ENST00000473625 1624 ntBASIC31.44■■■□□ 2.62
HMGXB3Q12766 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
HMGXB3Q12766 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC31.43■■■□□ 2.62
HMGXB3Q12766 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC31.43■■■□□ 2.62
HMGXB3Q12766 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC31.43■■■□□ 2.62
HMGXB3Q12766 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
HMGXB3Q12766 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
HMGXB3Q12766 NKTR-203ENST00000442970 646 ntTSL 2 BASIC31.43■■■□□ 2.62
HMGXB3Q12766 POLD4-211ENST00000539074 714 ntTSL 3 BASIC31.43■■■□□ 2.62
HMGXB3Q12766 AC007064.4-201ENST00000637740 555 ntBASIC31.43■■■□□ 2.62
HMGXB3Q12766 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
HMGXB3Q12766 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
HMGXB3Q12766 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
HMGXB3Q12766 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
HMGXB3Q12766 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
HMGXB3Q12766 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
HMGXB3Q12766 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
HMGXB3Q12766 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
HMGXB3Q12766 NEK7-201ENST00000367383 586 ntTSL 2 BASIC31.42■■■□□ 2.62
HMGXB3Q12766 DDT-204ENST00000404092 805 ntTSL 3 BASIC31.42■■■□□ 2.62
HMGXB3Q12766 DUT-210ENST00000559935 569 ntTSL 3 BASIC31.42■■■□□ 2.62
HMGXB3Q12766 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC31.42■■■□□ 2.62
HMGXB3Q12766 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
HMGXB3Q12766 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
HMGXB3Q12766 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
HMGXB3Q12766 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
HMGXB3Q12766 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
HMGXB3Q12766 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC31.42■■■□□ 2.62
HMGXB3Q12766 BSG-215ENST00000618006 1329 ntTSL 2 BASIC31.42■■■□□ 2.62
HMGXB3Q12766 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
HMGXB3Q12766 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
HMGXB3Q12766 AL157384.1-201ENST00000445995 2473 ntBASIC31.42■■■□□ 2.62
HMGXB3Q12766 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC31.41■■■□□ 2.62
HMGXB3Q12766 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
HMGXB3Q12766 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC31.41■■■□□ 2.62
HMGXB3Q12766 AC093214.1-201ENST00000511688 1107 ntBASIC31.41■■■□□ 2.62
HMGXB3Q12766 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC31.41■■■□□ 2.62
HMGXB3Q12766 HFE2-206ENST00000634927 506 ntTSL 4 BASIC31.41■■■□□ 2.62
HMGXB3Q12766 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms