Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.87■□□□□ 0.61
HADHBP55084 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HADHBP55084 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HADHBP55084 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HADHBP55084 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.87■□□□□ 0.61
HADHBP55084 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HADHBP55084 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HADHBP55084 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HADHBP55084 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.87■□□□□ 0.61
HADHBP55084 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HADHBP55084 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.87■□□□□ 0.61
HADHBP55084 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HADHBP55084 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HADHBP55084 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.87■□□□□ 0.61
HADHBP55084 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.87■□□□□ 0.61
HADHBP55084 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HADHBP55084 AC009949.1-201ENST00000623048 1830 ntBASIC18.87■□□□□ 0.61
HADHBP55084 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HADHBP55084 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HADHBP55084 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HADHBP55084 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HADHBP55084 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HADHBP55084 AP001094.4-201ENST00000579008 2176 ntBASIC18.86■□□□□ 0.61
HADHBP55084 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HADHBP55084 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.86■□□□□ 0.61
HADHBP55084 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HADHBP55084 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
HADHBP55084 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HADHBP55084 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HADHBP55084 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HADHBP55084 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HADHBP55084 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HADHBP55084 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
HADHBP55084 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HADHBP55084 KRT8P47-201ENST00000604727 1398 ntBASIC18.86■□□□□ 0.61
HADHBP55084 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.86■□□□□ 0.61
HADHBP55084 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HADHBP55084 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.86■□□□□ 0.61
HADHBP55084 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.86■□□□□ 0.61
HADHBP55084 AC024563.2-201ENST00000603282 481 ntBASIC18.86■□□□□ 0.61
HADHBP55084 AC141257.4-201ENST00000634557 245 ntBASIC18.86■□□□□ 0.61
HADHBP55084 AC136944.6-201ENST00000634818 245 ntBASIC18.86■□□□□ 0.61
HADHBP55084 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.86■□□□□ 0.61
HADHBP55084 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
HADHBP55084 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HADHBP55084 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HADHBP55084 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HADHBP55084 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HADHBP55084 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHBP55084 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHBP55084 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HADHBP55084 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HADHBP55084 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHBP55084 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.85■□□□□ 0.61
HADHBP55084 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHBP55084 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHBP55084 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHBP55084 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HADHBP55084 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHBP55084 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHBP55084 AC034232.1-201ENST00000506026 1064 ntBASIC18.85■□□□□ 0.61
HADHBP55084 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.85■□□□□ 0.61
HADHBP55084 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HADHBP55084 GCSHP2-201ENST00000560971 527 ntBASIC18.85■□□□□ 0.61
HADHBP55084 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.85■□□□□ 0.61
HADHBP55084 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.85■□□□□ 0.61
HADHBP55084 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
HADHBP55084 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HADHBP55084 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHBP55084 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.85■□□□□ 0.61
HADHBP55084 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHBP55084 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HADHBP55084 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHBP55084 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHBP55084 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.84■□□□□ 0.61
HADHBP55084 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HADHBP55084 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.84■□□□□ 0.61
HADHBP55084 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHBP55084 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHBP55084 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.84■□□□□ 0.61
HADHBP55084 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HADHBP55084 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHBP55084 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.84■□□□□ 0.61
HADHBP55084 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HADHBP55084 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHBP55084 CROCCP2-202ENST00000412962 2773 ntBASIC18.84■□□□□ 0.61
HADHBP55084 LINC01568-207ENST00000641790 1380 ntBASIC18.84■□□□□ 0.61
HADHBP55084 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHBP55084 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHBP55084 KRT18P22-201ENST00000402024 1347 ntBASIC18.84■□□□□ 0.61
HADHBP55084 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HADHBP55084 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.84■□□□□ 0.61
HADHBP55084 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.84■□□□□ 0.61
HADHBP55084 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.84■□□□□ 0.61
HADHBP55084 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.84■□□□□ 0.61
HADHBP55084 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.84■□□□□ 0.61
HADHBP55084 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.84■□□□□ 0.61
HADHBP55084 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.84■□□□□ 0.61
HADHBP55084 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHBP55084 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms