Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
EPHB4P54760 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.25■□□□□ 0.83
EPHB4P54760 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHB4P54760 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EPHB4P54760 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHB4P54760 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
EPHB4P54760 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHB4P54760 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHB4P54760 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.25■□□□□ 0.83
EPHB4P54760 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EPHB4P54760 HNRNPDP1-201ENST00000439535 754 ntBASIC20.25■□□□□ 0.83
EPHB4P54760 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.25■□□□□ 0.83
EPHB4P54760 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EPHB4P54760 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.25■□□□□ 0.83
EPHB4P54760 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EPHB4P54760 FAM215A-202ENST00000632077 792 ntBASIC20.25■□□□□ 0.83
EPHB4P54760 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHB4P54760 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.25■□□□□ 0.83
EPHB4P54760 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
EPHB4P54760 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.24■□□□□ 0.83
EPHB4P54760 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.24■□□□□ 0.83
EPHB4P54760 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB4P54760 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB4P54760 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.24■□□□□ 0.83
EPHB4P54760 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
EPHB4P54760 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB4P54760 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB4P54760 AL133373.2-201ENST00000623187 2828 ntBASIC20.24■□□□□ 0.83
EPHB4P54760 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB4P54760 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
EPHB4P54760 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB4P54760 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB4P54760 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB4P54760 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB4P54760 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB4P54760 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB4P54760 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB4P54760 POM121L3P-201ENST00000419331 1163 ntBASIC20.24■□□□□ 0.83
EPHB4P54760 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB4P54760 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.24■□□□□ 0.83
EPHB4P54760 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
EPHB4P54760 AC008608.2-201ENST00000606089 416 ntBASIC20.24■□□□□ 0.83
EPHB4P54760 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB4P54760 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.24■□□□□ 0.83
EPHB4P54760 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB4P54760 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB4P54760 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.24■□□□□ 0.83
EPHB4P54760 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.24■□□□□ 0.83
EPHB4P54760 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.24■□□□□ 0.83
EPHB4P54760 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB4P54760 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
EPHB4P54760 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB4P54760 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.23■□□□□ 0.83
EPHB4P54760 AL031598.1-201ENST00000561511 1773 ntBASIC20.23■□□□□ 0.83
EPHB4P54760 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
EPHB4P54760 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
EPHB4P54760 ZNF259P1-201ENST00000407656 1365 ntBASIC20.23■□□□□ 0.83
EPHB4P54760 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB4P54760 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.23■□□□□ 0.83
EPHB4P54760 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB4P54760 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB4P54760 AC141586.3-201ENST00000562166 1838 ntBASIC20.23■□□□□ 0.83
EPHB4P54760 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB4P54760 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB4P54760 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.23■□□□□ 0.83
EPHB4P54760 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.23■□□□□ 0.83
EPHB4P54760 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
EPHB4P54760 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB4P54760 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB4P54760 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB4P54760 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.23■□□□□ 0.83
EPHB4P54760 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
EPHB4P54760 AC132008.2-207ENST00000454517 770 ntBASIC20.23■□□□□ 0.83
EPHB4P54760 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
EPHB4P54760 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.23■□□□□ 0.83
EPHB4P54760 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.23■□□□□ 0.83
EPHB4P54760 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.23■□□□□ 0.83
EPHB4P54760 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.23■□□□□ 0.83
EPHB4P54760 AC116407.3-201ENST00000623905 1129 ntBASIC20.23■□□□□ 0.83
EPHB4P54760 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB4P54760 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB4P54760 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB4P54760 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB4P54760 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.23■□□□□ 0.83
EPHB4P54760 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB4P54760 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB4P54760 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB4P54760 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB4P54760 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.23■□□□□ 0.83
EPHB4P54760 LTB4R2-202ENST00000528054 3092 ntBASIC20.23■□□□□ 0.83
EPHB4P54760 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB4P54760 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EPHB4P54760 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.22■□□□□ 0.83
EPHB4P54760 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.22■□□□□ 0.83
EPHB4P54760 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB4P54760 AL353692.3-201ENST00000407031 1396 ntBASIC20.22■□□□□ 0.83
EPHB4P54760 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
EPHB4P54760 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
EPHB4P54760 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EPHB4P54760 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms