Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC008677.1-201ENST00000519230 1561 ntBASIC20.23■□□□□ 0.83
LBX1P52954 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.23■□□□□ 0.83
LBX1P52954 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20.23■□□□□ 0.83
LBX1P52954 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.23■□□□□ 0.83
LBX1P52954 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC20.23■□□□□ 0.83
LBX1P52954 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.23■□□□□ 0.83
LBX1P52954 AC004233.3-201ENST00000607794 1269 ntBASIC20.23■□□□□ 0.83
LBX1P52954 AC009118.2-201ENST00000613275 655 ntBASIC20.23■□□□□ 0.83
LBX1P52954 AC068587.10-201ENST00000641210 219 ntBASIC20.23■□□□□ 0.83
LBX1P52954 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LBX1P52954 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LBX1P52954 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LBX1P52954 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.23■□□□□ 0.83
LBX1P52954 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LBX1P52954 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LBX1P52954 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.22■□□□□ 0.83
LBX1P52954 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LBX1P52954 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LBX1P52954 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LBX1P52954 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LBX1P52954 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
LBX1P52954 AL355306.1-201ENST00000415580 579 ntBASIC20.22■□□□□ 0.83
LBX1P52954 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC20.22■□□□□ 0.83
LBX1P52954 RBPMS2P1-201ENST00000437762 623 ntBASIC20.22■□□□□ 0.83
LBX1P52954 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LBX1P52954 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.22■□□□□ 0.83
LBX1P52954 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.22■□□□□ 0.83
LBX1P52954 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.22■□□□□ 0.83
LBX1P52954 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LBX1P52954 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LBX1P52954 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LBX1P52954 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.22■□□□□ 0.83
LBX1P52954 AL133338.1-201ENST00000565695 1517 ntBASIC20.22■□□□□ 0.83
LBX1P52954 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LBX1P52954 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LBX1P52954 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.21■□□□□ 0.83
LBX1P52954 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LBX1P52954 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LBX1P52954 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.21■□□□□ 0.83
LBX1P52954 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LBX1P52954 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.21■□□□□ 0.83
LBX1P52954 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.21■□□□□ 0.83
LBX1P52954 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.21■□□□□ 0.83
LBX1P52954 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.21■□□□□ 0.83
LBX1P52954 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.21■□□□□ 0.83
LBX1P52954 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.21■□□□□ 0.83
LBX1P52954 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.21■□□□□ 0.83
LBX1P52954 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC20.21■□□□□ 0.83
LBX1P52954 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.21■□□□□ 0.83
LBX1P52954 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LBX1P52954 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.21■□□□□ 0.83
LBX1P52954 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.21■□□□□ 0.83
LBX1P52954 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LBX1P52954 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
LBX1P52954 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LBX1P52954 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LBX1P52954 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LBX1P52954 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LBX1P52954 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
LBX1P52954 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
LBX1P52954 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.83
LBX1P52954 AC148477.5-201ENST00000625164 1645 ntBASIC20.2■□□□□ 0.82
LBX1P52954 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LBX1P52954 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LBX1P52954 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
LBX1P52954 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC20.2■□□□□ 0.82
LBX1P52954 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LBX1P52954 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.2■□□□□ 0.82
LBX1P52954 FAM86C2P-203ENST00000528684 1004 ntBASIC20.2■□□□□ 0.82
LBX1P52954 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LBX1P52954 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.2■□□□□ 0.82
LBX1P52954 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC20.2■□□□□ 0.82
LBX1P52954 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.2■□□□□ 0.82
LBX1P52954 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.2■□□□□ 0.82
LBX1P52954 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.2■□□□□ 0.82
LBX1P52954 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LBX1P52954 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LBX1P52954 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
LBX1P52954 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LBX1P52954 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.2■□□□□ 0.82
LBX1P52954 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LBX1P52954 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LBX1P52954 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
LBX1P52954 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.2■□□□□ 0.82
LBX1P52954 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LBX1P52954 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LBX1P52954 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LBX1P52954 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LBX1P52954 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
LBX1P52954 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.19■□□□□ 0.82
LBX1P52954 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LBX1P52954 IRX1P1-201ENST00000438849 1838 ntBASIC20.19■□□□□ 0.82
LBX1P52954 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LBX1P52954 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LBX1P52954 AC002056.1-201ENST00000395613 760 ntBASIC20.19■□□□□ 0.82
LBX1P52954 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.19■□□□□ 0.82
LBX1P52954 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.19■□□□□ 0.82
LBX1P52954 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LBX1P52954 AC079140.1-201ENST00000508039 487 ntBASIC20.19■□□□□ 0.82
LBX1P52954 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms