Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LHX1P48742 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LHX1P48742 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.06■□□□□ 0.64
LHX1P48742 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.06■□□□□ 0.64
LHX1P48742 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LHX1P48742 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.06■□□□□ 0.64
LHX1P48742 UNC93B7-201ENST00000509439 705 ntBASIC19.06■□□□□ 0.64
LHX1P48742 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.06■□□□□ 0.64
LHX1P48742 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.06■□□□□ 0.64
LHX1P48742 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.06■□□□□ 0.64
LHX1P48742 MIR5100-201ENST00000579544 119 ntBASIC19.06■□□□□ 0.64
LHX1P48742 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LHX1P48742 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LHX1P48742 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LHX1P48742 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.06■□□□□ 0.64
LHX1P48742 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LHX1P48742 BCL2-203ENST00000589955 5011 ntBASIC19.06■□□□□ 0.64
LHX1P48742 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LHX1P48742 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LHX1P48742 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LHX1P48742 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.06■□□□□ 0.64
LHX1P48742 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.05■□□□□ 0.64
LHX1P48742 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LHX1P48742 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LHX1P48742 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LHX1P48742 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.05■□□□□ 0.64
LHX1P48742 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LHX1P48742 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
LHX1P48742 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LHX1P48742 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
LHX1P48742 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LHX1P48742 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.05■□□□□ 0.64
LHX1P48742 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LHX1P48742 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.05■□□□□ 0.64
LHX1P48742 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.05■□□□□ 0.64
LHX1P48742 RN7SL510P-201ENST00000581311 263 ntBASIC19.05■□□□□ 0.64
LHX1P48742 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LHX1P48742 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.05■□□□□ 0.64
LHX1P48742 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.05■□□□□ 0.64
LHX1P48742 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LHX1P48742 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LHX1P48742 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LHX1P48742 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LHX1P48742 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LHX1P48742 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.05■□□□□ 0.64
LHX1P48742 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LHX1P48742 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.05■□□□□ 0.64
LHX1P48742 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LHX1P48742 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.05■□□□□ 0.64
LHX1P48742 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
LHX1P48742 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LHX1P48742 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.04■□□□□ 0.64
LHX1P48742 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LHX1P48742 REXO1L9P-201ENST00000604264 2108 ntBASIC19.04■□□□□ 0.64
LHX1P48742 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LHX1P48742 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
LHX1P48742 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LHX1P48742 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LHX1P48742 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LHX1P48742 AC004870.1-201ENST00000315132 882 ntBASIC19.04■□□□□ 0.64
LHX1P48742 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LHX1P48742 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.04■□□□□ 0.64
LHX1P48742 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LHX1P48742 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.04■□□□□ 0.64
LHX1P48742 AC096633.1-201ENST00000422446 749 ntBASIC19.04■□□□□ 0.64
LHX1P48742 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.04■□□□□ 0.64
LHX1P48742 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.04■□□□□ 0.64
LHX1P48742 AC011467.2-201ENST00000598425 242 ntBASIC19.04■□□□□ 0.64
LHX1P48742 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LHX1P48742 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.04■□□□□ 0.64
LHX1P48742 AL591684.3-201ENST00000605187 298 ntBASIC19.04■□□□□ 0.64
LHX1P48742 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LHX1P48742 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LHX1P48742 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LHX1P48742 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
LHX1P48742 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LHX1P48742 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LHX1P48742 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LHX1P48742 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
LHX1P48742 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LHX1P48742 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LHX1P48742 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LHX1P48742 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LHX1P48742 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LHX1P48742 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.03■□□□□ 0.64
LHX1P48742 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LHX1P48742 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LHX1P48742 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LHX1P48742 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LHX1P48742 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LHX1P48742 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LHX1P48742 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LHX1P48742 RCN1P2-201ENST00000398357 915 ntBASIC19.03■□□□□ 0.64
LHX1P48742 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LHX1P48742 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
LHX1P48742 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.03■□□□□ 0.64
LHX1P48742 FAAHP1-202ENST00000446499 1238 ntBASIC19.03■□□□□ 0.64
LHX1P48742 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.03■□□□□ 0.64
LHX1P48742 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.03■□□□□ 0.64
LHX1P48742 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms