Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN6P29350 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PTPN6P29350 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN6P29350 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN6P29350 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN6P29350 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN6P29350 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN6P29350 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN6P29350 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN6P29350 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN6P29350 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN6P29350 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN6P29350 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN6P29350 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN6P29350 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN6P29350 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN6P29350 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN6P29350 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN6P29350 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN6P29350 MIR1224-201ENST00000408193 85 ntBASIC17.11■□□□□ 0.33
PTPN6P29350 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN6P29350 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PTPN6P29350 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN6P29350 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.11■□□□□ 0.33
PTPN6P29350 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN6P29350 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN6P29350 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN6P29350 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN6P29350 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PTPN6P29350 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN6P29350 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN6P29350 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN6P29350 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN6P29350 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN6P29350 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN6P29350 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN6P29350 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN6P29350 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
PTPN6P29350 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN6P29350 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN6P29350 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PTPN6P29350 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN6P29350 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN6P29350 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN6P29350 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN6P29350 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPN6P29350 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
PTPN6P29350 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN6P29350 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.1■□□□□ 0.33
PTPN6P29350 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN6P29350 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN6P29350 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPN6P29350 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PTPN6P29350 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PTPN6P29350 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
PTPN6P29350 AC117947.1-201ENST00000427448 529 ntBASIC17.1■□□□□ 0.33
PTPN6P29350 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN6P29350 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN6P29350 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PTPN6P29350 COX11P1-201ENST00000489116 835 ntBASIC17.1■□□□□ 0.33
PTPN6P29350 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN6P29350 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
PTPN6P29350 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PTPN6P29350 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN6P29350 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PTPN6P29350 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN6P29350 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPN6P29350 AC010331.1-201ENST00000611423 582 ntBASIC17.1■□□□□ 0.33
PTPN6P29350 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN6P29350 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PTPN6P29350 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN6P29350 AC080080.1-201ENST00000625121 2420 ntBASIC17.1■□□□□ 0.33
PTPN6P29350 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPN6P29350 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPN6P29350 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN6P29350 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN6P29350 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN6P29350 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PTPN6P29350 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN6P29350 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PTPN6P29350 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN6P29350 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN6P29350 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN6P29350 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN6P29350 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PTPN6P29350 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN6P29350 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PTPN6P29350 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
PTPN6P29350 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN6P29350 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN6P29350 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN6P29350 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN6P29350 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN6P29350 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.09■□□□□ 0.33
PTPN6P29350 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN6P29350 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN6P29350 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.09■□□□□ 0.33
PTPN6P29350 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN6P29350 DUX4L26-201ENST00000489078 1255 ntBASIC17.09■□□□□ 0.33
PTPN6P29350 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms