Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.77■■□□□ 1.08
ATP2B4P23634 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2B4P23634 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.77■■□□□ 1.08
ATP2B4P23634 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.77■■□□□ 1.08
ATP2B4P23634 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.77■■□□□ 1.08
ATP2B4P23634 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2B4P23634 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
ATP2B4P23634 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2B4P23634 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
ATP2B4P23634 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2B4P23634 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP2B4P23634 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
ATP2B4P23634 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
ATP2B4P23634 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP2B4P23634 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
ATP2B4P23634 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.76■■□□□ 1.07
ATP2B4P23634 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP2B4P23634 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP2B4P23634 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP2B4P23634 KRT18P27-201ENST00000427733 1299 ntBASIC21.76■■□□□ 1.07
ATP2B4P23634 AC092183.1-201ENST00000469884 875 ntBASIC21.76■■□□□ 1.07
ATP2B4P23634 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.76■■□□□ 1.07
ATP2B4P23634 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP2B4P23634 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.76■■□□□ 1.07
ATP2B4P23634 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP2B4P23634 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2B4P23634 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.75■■□□□ 1.07
ATP2B4P23634 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP2B4P23634 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ATP2B4P23634 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP2B4P23634 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP2B4P23634 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.75■■□□□ 1.07
ATP2B4P23634 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP2B4P23634 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2B4P23634 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.75■■□□□ 1.07
ATP2B4P23634 SPDYE21P-201ENST00000413323 827 ntBASIC21.75■■□□□ 1.07
ATP2B4P23634 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP2B4P23634 AC009947.1-201ENST00000444350 727 ntBASIC21.75■■□□□ 1.07
ATP2B4P23634 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.75■■□□□ 1.07
ATP2B4P23634 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC21.75■■□□□ 1.07
ATP2B4P23634 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.75■■□□□ 1.07
ATP2B4P23634 AC006557.2-201ENST00000592985 1240 ntBASIC21.75■■□□□ 1.07
ATP2B4P23634 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
ATP2B4P23634 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2B4P23634 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2B4P23634 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2B4P23634 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2B4P23634 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.74■■□□□ 1.07
ATP2B4P23634 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP2B4P23634 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP2B4P23634 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP2B4P23634 AC073592.3-201ENST00000625118 1834 ntBASIC21.74■■□□□ 1.07
ATP2B4P23634 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP2B4P23634 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP2B4P23634 UPF3AP3-201ENST00000420996 769 ntBASIC21.74■■□□□ 1.07
ATP2B4P23634 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.74■■□□□ 1.07
ATP2B4P23634 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.74■■□□□ 1.07
ATP2B4P23634 AC040169.1-201ENST00000565382 521 ntBASIC21.74■■□□□ 1.07
ATP2B4P23634 MIR1199-201ENST00000621445 119 ntBASIC21.74■■□□□ 1.07
ATP2B4P23634 AC073592.5-201ENST00000624854 528 ntBASIC21.74■■□□□ 1.07
ATP2B4P23634 PGM5P2-202ENST00000637225 1043 ntBASIC21.74■■□□□ 1.07
ATP2B4P23634 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP2B4P23634 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.74■■□□□ 1.07
ATP2B4P23634 AC004817.3-201ENST00000602957 2129 ntBASIC21.74■■□□□ 1.07
ATP2B4P23634 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ATP2B4P23634 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.74■■□□□ 1.07
ATP2B4P23634 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2B4P23634 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
ATP2B4P23634 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
ATP2B4P23634 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2B4P23634 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
ATP2B4P23634 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP2B4P23634 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2B4P23634 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2B4P23634 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
ATP2B4P23634 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2B4P23634 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.73■■□□□ 1.07
ATP2B4P23634 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP2B4P23634 AC073621.1-201ENST00000392730 636 ntBASIC21.73■■□□□ 1.07
ATP2B4P23634 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP2B4P23634 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.73■■□□□ 1.07
ATP2B4P23634 RNA5SP416-201ENST00000516838 111 ntBASIC21.73■■□□□ 1.07
ATP2B4P23634 AC055717.3-201ENST00000622967 595 ntBASIC21.73■■□□□ 1.07
ATP2B4P23634 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2B4P23634 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP2B4P23634 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.73■■□□□ 1.07
ATP2B4P23634 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
ATP2B4P23634 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2B4P23634 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2B4P23634 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2B4P23634 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2B4P23634 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2B4P23634 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2B4P23634 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ATP2B4P23634 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2B4P23634 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2B4P23634 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.72■■□□□ 1.07
ATP2B4P23634 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2B4P23634 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2B4P23634 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms