Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FREM3P0C091 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
FREM3P0C091 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 AL845331.1-201ENST00000424978 1190 ntBASIC16.36■□□□□ 0.21
FREM3P0C091 IGHV3-47-201ENST00000425060 335 ntBASIC16.36■□□□□ 0.21
FREM3P0C091 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.36■□□□□ 0.21
FREM3P0C091 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 BNIP3P18-201ENST00000593976 575 ntBASIC16.36■□□□□ 0.21
FREM3P0C091 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.36■□□□□ 0.21
FREM3P0C091 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.36■□□□□ 0.21
FREM3P0C091 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.36■□□□□ 0.21
FREM3P0C091 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
FREM3P0C091 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.36■□□□□ 0.21
FREM3P0C091 KRT8P47-201ENST00000604727 1398 ntBASIC16.36■□□□□ 0.21
FREM3P0C091 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
FREM3P0C091 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
FREM3P0C091 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.36■□□□□ 0.21
FREM3P0C091 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.36■□□□□ 0.21
FREM3P0C091 PRELID1P1-202ENST00000567272 903 ntBASIC16.36■□□□□ 0.21
FREM3P0C091 AC090616.6-201ENST00000582640 721 ntBASIC16.36■□□□□ 0.21
FREM3P0C091 AL138831.2-201ENST00000606564 490 ntBASIC16.36■□□□□ 0.21
FREM3P0C091 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.36■□□□□ 0.21
FREM3P0C091 NOC2LP1-202ENST00000452600 2235 ntBASIC16.36■□□□□ 0.21
FREM3P0C091 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FREM3P0C091 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.35■□□□□ 0.21
FREM3P0C091 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
FREM3P0C091 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FREM3P0C091 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FREM3P0C091 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FREM3P0C091 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FREM3P0C091 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.35■□□□□ 0.21
FREM3P0C091 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.35■□□□□ 0.21
FREM3P0C091 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.35■□□□□ 0.21
FREM3P0C091 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FREM3P0C091 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
FREM3P0C091 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FREM3P0C091 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.35■□□□□ 0.21
FREM3P0C091 AC093677.2-201ENST00000600169 1863 ntBASIC16.35■□□□□ 0.21
FREM3P0C091 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
FREM3P0C091 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.35■□□□□ 0.21
FREM3P0C091 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FREM3P0C091 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.35■□□□□ 0.21
FREM3P0C091 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.35■□□□□ 0.21
FREM3P0C091 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.34■□□□□ 0.21
FREM3P0C091 TSSC2-201ENST00000450217 709 ntBASIC16.34■□□□□ 0.21
FREM3P0C091 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.34■□□□□ 0.21
FREM3P0C091 AC092119.3-201ENST00000612618 583 ntBASIC16.34■□□□□ 0.21
FREM3P0C091 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FREM3P0C091 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FREM3P0C091 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.34■□□□□ 0.21
FREM3P0C091 PHGDH-209ENST00000641074 1780 ntBASIC16.34■□□□□ 0.21
FREM3P0C091 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.34■□□□□ 0.21
FREM3P0C091 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FREM3P0C091 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.34■□□□□ 0.21
FREM3P0C091 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
FREM3P0C091 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
FREM3P0C091 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.34■□□□□ 0.21
FREM3P0C091 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FREM3P0C091 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
FREM3P0C091 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FREM3P0C091 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
FREM3P0C091 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
FREM3P0C091 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.34■□□□□ 0.21
FREM3P0C091 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.34■□□□□ 0.21
FREM3P0C091 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.34■□□□□ 0.21
FREM3P0C091 KRT18P31-201ENST00000506277 1292 ntBASIC16.34■□□□□ 0.21
FREM3P0C091 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FREM3P0C091 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FREM3P0C091 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.34■□□□□ 0.21
FREM3P0C091 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.34■□□□□ 0.21
FREM3P0C091 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.34■□□□□ 0.21
FREM3P0C091 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
FREM3P0C091 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
FREM3P0C091 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FREM3P0C091 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms