Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.63■□□□□ 0.09
CSF1P09603 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.63■□□□□ 0.09
CSF1P09603 AL355075.4-201ENST00000554988 638 ntBASIC15.63■□□□□ 0.09
CSF1P09603 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.63■□□□□ 0.09
CSF1P09603 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.63■□□□□ 0.09
CSF1P09603 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSF1P09603 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSF1P09603 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSF1P09603 AP001094.4-201ENST00000579008 2176 ntBASIC15.63■□□□□ 0.09
CSF1P09603 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSF1P09603 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSF1P09603 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSF1P09603 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSF1P09603 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSF1P09603 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.63■□□□□ 0.09
CSF1P09603 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSF1P09603 KRT8P41-201ENST00000533985 1514 ntBASIC15.63■□□□□ 0.09
CSF1P09603 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSF1P09603 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSF1P09603 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CSF1P09603 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSF1P09603 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSF1P09603 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSF1P09603 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSF1P09603 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CSF1P09603 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.62■□□□□ 0.09
CSF1P09603 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.62■□□□□ 0.09
CSF1P09603 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.62■□□□□ 0.09
CSF1P09603 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.62■□□□□ 0.09
CSF1P09603 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.62■□□□□ 0.09
CSF1P09603 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.62■□□□□ 0.09
CSF1P09603 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.62■□□□□ 0.09
CSF1P09603 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.62■□□□□ 0.09
CSF1P09603 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSF1P09603 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSF1P09603 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSF1P09603 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSF1P09603 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSF1P09603 AC011676.5-201ENST00000624864 2660 ntBASIC15.62■□□□□ 0.09
CSF1P09603 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSF1P09603 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.62■□□□□ 0.09
CSF1P09603 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.62■□□□□ 0.09
CSF1P09603 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CSF1P09603 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSF1P09603 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSF1P09603 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSF1P09603 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSF1P09603 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CSF1P09603 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CSF1P09603 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CSF1P09603 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CSF1P09603 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CSF1P09603 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CSF1P09603 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.61■□□□□ 0.09
CSF1P09603 AC022211.2-201ENST00000585075 2527 ntBASIC15.61■□□□□ 0.09
CSF1P09603 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.61■□□□□ 0.09
CSF1P09603 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CSF1P09603 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
CSF1P09603 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.61■□□□□ 0.09
CSF1P09603 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.61■□□□□ 0.09
CSF1P09603 AL355355.2-201ENST00000442321 338 ntBASIC15.61■□□□□ 0.09
CSF1P09603 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.61■□□□□ 0.09
CSF1P09603 KRT18P41-201ENST00000518924 1277 ntBASIC15.61■□□□□ 0.09
CSF1P09603 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.61■□□□□ 0.09
CSF1P09603 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.61■□□□□ 0.09
CSF1P09603 AC026471.5-201ENST00000615068 467 ntBASIC15.61■□□□□ 0.09
CSF1P09603 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.61■□□□□ 0.09
CSF1P09603 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 HTR7P1-201ENST00000538670 1336 ntBASIC15.61■□□□□ 0.09
CSF1P09603 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CSF1P09603 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
CSF1P09603 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CSF1P09603 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 LINC00602-201ENST00000629776 2065 ntBASIC15.61■□□□□ 0.09
CSF1P09603 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.61■□□□□ 0.09
CSF1P09603 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSF1P09603 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.61■□□□□ 0.09
CSF1P09603 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSF1P09603 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSF1P09603 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSF1P09603 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSF1P09603 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms