Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD3DP04234 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.32■□□□□ 0.04
CD3DP04234 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CD3DP04234 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD3DP04234 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD3DP04234 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.32■□□□□ 0.04
CD3DP04234 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD3DP04234 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD3DP04234 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD3DP04234 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD3DP04234 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.32■□□□□ 0.04
CD3DP04234 CKBP1-201ENST00000565489 1086 ntBASIC15.32■□□□□ 0.04
CD3DP04234 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
CD3DP04234 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.32■□□□□ 0.04
CD3DP04234 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.32■□□□□ 0.04
CD3DP04234 AC046158.3-201ENST00000624947 2558 ntBASIC15.32■□□□□ 0.04
CD3DP04234 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD3DP04234 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD3DP04234 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.32■□□□□ 0.04
CD3DP04234 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD3DP04234 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.32■□□□□ 0.04
CD3DP04234 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CD3DP04234 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CD3DP04234 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.32■□□□□ 0.04
CD3DP04234 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD3DP04234 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.32■□□□□ 0.04
CD3DP04234 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD3DP04234 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.32■□□□□ 0.04
CD3DP04234 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.32■□□□□ 0.04
CD3DP04234 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD3DP04234 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.31■□□□□ 0.04
CD3DP04234 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.31■□□□□ 0.04
CD3DP04234 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD3DP04234 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CD3DP04234 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD3DP04234 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD3DP04234 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.31■□□□□ 0.04
CD3DP04234 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD3DP04234 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD3DP04234 PCDHB19P-201ENST00000570871 2371 ntBASIC15.31■□□□□ 0.04
CD3DP04234 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD3DP04234 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.31■□□□□ 0.04
CD3DP04234 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.31■□□□□ 0.04
CD3DP04234 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.31■□□□□ 0.04
CD3DP04234 TSPY6P-201ENST00000448518 926 ntBASIC15.31■□□□□ 0.04
CD3DP04234 AC006970.2-201ENST00000450065 779 ntBASIC15.31■□□□□ 0.04
CD3DP04234 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
CD3DP04234 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.31■□□□□ 0.04
CD3DP04234 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.31■□□□□ 0.04
CD3DP04234 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.31■□□□□ 0.04
CD3DP04234 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD3DP04234 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CD3DP04234 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD3DP04234 AC009102.3-201ENST00000623118 1491 ntBASIC15.31■□□□□ 0.04
CD3DP04234 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD3DP04234 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD3DP04234 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD3DP04234 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.31■□□□□ 0.04
CD3DP04234 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD3DP04234 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CD3DP04234 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD3DP04234 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CD3DP04234 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.31■□□□□ 0.04
CD3DP04234 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD3DP04234 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD3DP04234 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CD3DP04234 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD3DP04234 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD3DP04234 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD3DP04234 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CD3DP04234 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD3DP04234 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD3DP04234 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD3DP04234 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD3DP04234 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD3DP04234 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD3DP04234 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD3DP04234 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD3DP04234 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.3■□□□□ 0.04
CD3DP04234 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD3DP04234 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD3DP04234 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD3DP04234 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.3■□□□□ 0.04
CD3DP04234 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CD3DP04234 AC004951.3-201ENST00000418645 1148 ntBASIC15.3■□□□□ 0.04
CD3DP04234 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD3DP04234 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD3DP04234 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.3■□□□□ 0.04
CD3DP04234 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD3DP04234 AL163051.1-201ENST00000569214 1512 ntBASIC15.3■□□□□ 0.04
CD3DP04234 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CD3DP04234 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.3■□□□□ 0.04
CD3DP04234 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD3DP04234 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CD3DP04234 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD3DP04234 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.3■□□□□ 0.04
CD3DP04234 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD3DP04234 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.3■□□□□ 0.04
CD3DP04234 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CD3DP04234 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms