Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
GFRA3O60609 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GFRA3O60609 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA3O60609 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA3O60609 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.4■□□□□ 0.38
GFRA3O60609 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA3O60609 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.4■□□□□ 0.38
GFRA3O60609 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.4■□□□□ 0.38
GFRA3O60609 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA3O60609 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.4■□□□□ 0.38
GFRA3O60609 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.4■□□□□ 0.38
GFRA3O60609 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.4■□□□□ 0.38
GFRA3O60609 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.4■□□□□ 0.38
GFRA3O60609 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.4■□□□□ 0.38
GFRA3O60609 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA3O60609 AC026120.1-201ENST00000611536 926 ntBASIC17.4■□□□□ 0.38
GFRA3O60609 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA3O60609 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA3O60609 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
GFRA3O60609 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA3O60609 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
GFRA3O60609 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA3O60609 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA3O60609 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA3O60609 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA3O60609 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
GFRA3O60609 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA3O60609 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFRA3O60609 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
GFRA3O60609 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
GFRA3O60609 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.39■□□□□ 0.38
GFRA3O60609 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
GFRA3O60609 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.39■□□□□ 0.37
GFRA3O60609 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GFRA3O60609 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.39■□□□□ 0.37
GFRA3O60609 ADH5P3-201ENST00000433842 1137 ntBASIC17.39■□□□□ 0.37
GFRA3O60609 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.39■□□□□ 0.37
GFRA3O60609 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.39■□□□□ 0.37
GFRA3O60609 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.39■□□□□ 0.37
GFRA3O60609 KRT18P65-201ENST00000439811 1286 ntBASIC17.39■□□□□ 0.37
GFRA3O60609 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GFRA3O60609 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.39■□□□□ 0.37
GFRA3O60609 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.39■□□□□ 0.37
GFRA3O60609 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFRA3O60609 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.39■□□□□ 0.37
GFRA3O60609 AP001059.3-201ENST00000619053 235 ntBASIC17.39■□□□□ 0.37
GFRA3O60609 AD001527.2-201ENST00000622994 785 ntBASIC17.39■□□□□ 0.37
GFRA3O60609 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GFRA3O60609 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.39■□□□□ 0.37
GFRA3O60609 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFRA3O60609 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.39■□□□□ 0.37
GFRA3O60609 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFRA3O60609 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFRA3O60609 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.39■□□□□ 0.37
GFRA3O60609 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GFRA3O60609 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA3O60609 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.38■□□□□ 0.37
GFRA3O60609 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
GFRA3O60609 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
GFRA3O60609 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA3O60609 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.38■□□□□ 0.37
GFRA3O60609 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA3O60609 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.38■□□□□ 0.37
GFRA3O60609 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.38■□□□□ 0.37
GFRA3O60609 AC004945.1-201ENST00000416738 983 ntBASIC17.38■□□□□ 0.37
GFRA3O60609 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA3O60609 KRT18P32-201ENST00000424695 1287 ntBASIC17.38■□□□□ 0.37
GFRA3O60609 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA3O60609 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.38■□□□□ 0.37
GFRA3O60609 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.38■□□□□ 0.37
GFRA3O60609 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.38■□□□□ 0.37
GFRA3O60609 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.38■□□□□ 0.37
GFRA3O60609 AC112698.1-201ENST00000510299 916 ntBASIC17.38■□□□□ 0.37
GFRA3O60609 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.38■□□□□ 0.37
GFRA3O60609 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.38■□□□□ 0.37
GFRA3O60609 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.38■□□□□ 0.37
GFRA3O60609 AC010336.2-201ENST00000564226 506 ntBASIC17.38■□□□□ 0.37
GFRA3O60609 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
GFRA3O60609 AL805961.1-202ENST00000641562 540 ntBASIC17.38■□□□□ 0.37
GFRA3O60609 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.38■□□□□ 0.37
GFRA3O60609 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA3O60609 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
GFRA3O60609 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA3O60609 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.38■□□□□ 0.37
GFRA3O60609 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA3O60609 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFRA3O60609 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
GFRA3O60609 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA3O60609 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.37■□□□□ 0.37
GFRA3O60609 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA3O60609 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
GFRA3O60609 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA3O60609 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA3O60609 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA3O60609 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA3O60609 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.37■□□□□ 0.37
GFRA3O60609 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA3O60609 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA3O60609 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.37■□□□□ 0.37
GFRA3O60609 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms