Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
GRIN3BO60391 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
GRIN3BO60391 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
GRIN3BO60391 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
GRIN3BO60391 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
GRIN3BO60391 AL627223.1-201ENST00000416693 442 ntBASIC21.85■■□□□ 1.09
GRIN3BO60391 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC21.85■■□□□ 1.09
GRIN3BO60391 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
GRIN3BO60391 AC122714.2-201ENST00000502787 707 ntBASIC21.85■■□□□ 1.09
GRIN3BO60391 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC21.85■■□□□ 1.09
GRIN3BO60391 HFE2-206ENST00000634927 506 ntTSL 4 BASIC21.85■■□□□ 1.09
GRIN3BO60391 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
GRIN3BO60391 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.85■■□□□ 1.09
GRIN3BO60391 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.85■■□□□ 1.09
GRIN3BO60391 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
GRIN3BO60391 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.85■■□□□ 1.09
GRIN3BO60391 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
GRIN3BO60391 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.85■■□□□ 1.09
GRIN3BO60391 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
GRIN3BO60391 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
GRIN3BO60391 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
GRIN3BO60391 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
GRIN3BO60391 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.85■■□□□ 1.09
GRIN3BO60391 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
GRIN3BO60391 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
GRIN3BO60391 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
GRIN3BO60391 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
GRIN3BO60391 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.84■■□□□ 1.09
GRIN3BO60391 AC003669.1-201ENST00000334569 611 ntBASIC21.84■■□□□ 1.09
GRIN3BO60391 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.84■■□□□ 1.09
GRIN3BO60391 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.84■■□□□ 1.09
GRIN3BO60391 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.84■■□□□ 1.09
GRIN3BO60391 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC21.84■■□□□ 1.09
GRIN3BO60391 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC21.84■■□□□ 1.09
GRIN3BO60391 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
GRIN3BO60391 AC068137.2-201ENST00000605408 478 ntBASIC21.84■■□□□ 1.09
GRIN3BO60391 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
GRIN3BO60391 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
GRIN3BO60391 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
GRIN3BO60391 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
GRIN3BO60391 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.84■■□□□ 1.09
GRIN3BO60391 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
GRIN3BO60391 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.83■■□□□ 1.09
GRIN3BO60391 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
GRIN3BO60391 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
GRIN3BO60391 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
GRIN3BO60391 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.83■■□□□ 1.09
GRIN3BO60391 CENPM-205ENST00000404067 905 ntTSL 3 BASIC21.83■■□□□ 1.09
GRIN3BO60391 AL020989.1-201ENST00000422979 469 ntBASIC21.83■■□□□ 1.09
GRIN3BO60391 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.83■■□□□ 1.09
GRIN3BO60391 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.83■■□□□ 1.09
GRIN3BO60391 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.83■■□□□ 1.09
GRIN3BO60391 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.83■■□□□ 1.09
GRIN3BO60391 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
GRIN3BO60391 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
GRIN3BO60391 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.83■■□□□ 1.09
GRIN3BO60391 AL391422.3-201ENST00000603791 2761 ntBASIC21.83■■□□□ 1.08
GRIN3BO60391 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
GRIN3BO60391 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.08
GRIN3BO60391 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
GRIN3BO60391 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.83■■□□□ 1.08
GRIN3BO60391 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.82■■□□□ 1.08
GRIN3BO60391 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
GRIN3BO60391 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
GRIN3BO60391 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.82■■□□□ 1.08
GRIN3BO60391 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GRIN3BO60391 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.82■■□□□ 1.08
GRIN3BO60391 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GRIN3BO60391 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GRIN3BO60391 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
GRIN3BO60391 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
GRIN3BO60391 RAC2-204ENST00000406508 893 ntTSL 5 BASIC21.82■■□□□ 1.08
GRIN3BO60391 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC21.82■■□□□ 1.08
GRIN3BO60391 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.82■■□□□ 1.08
GRIN3BO60391 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC21.82■■□□□ 1.08
GRIN3BO60391 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
GRIN3BO60391 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
GRIN3BO60391 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
GRIN3BO60391 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.82■■□□□ 1.08
GRIN3BO60391 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.82■■□□□ 1.08
GRIN3BO60391 IRX1P1-201ENST00000438849 1838 ntBASIC21.82■■□□□ 1.08
GRIN3BO60391 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.82■■□□□ 1.08
GRIN3BO60391 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
GRIN3BO60391 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GRIN3BO60391 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GRIN3BO60391 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GRIN3BO60391 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
GRIN3BO60391 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
GRIN3BO60391 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GRIN3BO60391 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GRIN3BO60391 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GRIN3BO60391 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
GRIN3BO60391 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
GRIN3BO60391 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.81■■□□□ 1.08
GRIN3BO60391 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
GRIN3BO60391 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
GRIN3BO60391 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
GRIN3BO60391 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.81■■□□□ 1.08
GRIN3BO60391 GOLGA6L11P-201ENST00000417252 1298 ntBASIC21.81■■□□□ 1.08
GRIN3BO60391 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms