Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA12O60330 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA12O60330 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA12O60330 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA12O60330 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA12O60330 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGA12O60330 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA12O60330 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA12O60330 KRT18P13-201ENST00000400056 1290 ntBASIC17.87■□□□□ 0.45
PCDHGA12O60330 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
PCDHGA12O60330 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGA12O60330 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PCDHGA12O60330 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA12O60330 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGA12O60330 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA12O60330 KRT18P58-201ENST00000527480 1120 ntBASIC17.87■□□□□ 0.45
PCDHGA12O60330 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHGA12O60330 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGA12O60330 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHGA12O60330 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PCDHGA12O60330 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PCDHGA12O60330 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGA12O60330 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA12O60330 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA12O60330 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA12O60330 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGA12O60330 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA12O60330 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA12O60330 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA12O60330 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGA12O60330 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA12O60330 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA12O60330 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGA12O60330 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA12O60330 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PCDHGA12O60330 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA12O60330 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA12O60330 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGA12O60330 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA12O60330 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCDHGA12O60330 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA12O60330 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA12O60330 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHGA12O60330 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA12O60330 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGA12O60330 RNPS1P1-201ENST00000507437 918 ntBASIC17.86■□□□□ 0.45
PCDHGA12O60330 AC113404.2-201ENST00000507884 177 ntBASIC17.86■□□□□ 0.45
PCDHGA12O60330 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHGA12O60330 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCDHGA12O60330 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGA12O60330 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCDHGA12O60330 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA12O60330 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA12O60330 AL163051.1-201ENST00000569214 1512 ntBASIC17.86■□□□□ 0.45
PCDHGA12O60330 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA12O60330 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGA12O60330 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA12O60330 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGA12O60330 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHGA12O60330 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA12O60330 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA12O60330 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHGA12O60330 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA12O60330 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHGA12O60330 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA12O60330 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA12O60330 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA12O60330 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA12O60330 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA12O60330 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA12O60330 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PCDHGA12O60330 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA12O60330 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGA12O60330 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA12O60330 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCDHGA12O60330 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA12O60330 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA12O60330 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGA12O60330 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGA12O60330 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGA12O60330 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
PCDHGA12O60330 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA12O60330 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.85■□□□□ 0.45
PCDHGA12O60330 AC096582.2-201ENST00000510860 516 ntBASIC17.85■□□□□ 0.45
PCDHGA12O60330 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
PCDHGA12O60330 SLC25A1P1-201ENST00000528351 927 ntBASIC17.85■□□□□ 0.45
PCDHGA12O60330 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGA12O60330 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA12O60330 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGA12O60330 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGA12O60330 AL357033.4-201ENST00000617703 1807 ntBASIC17.85■□□□□ 0.45
PCDHGA12O60330 AL390961.4-201ENST00000623958 2535 ntBASIC17.85■□□□□ 0.45
PCDHGA12O60330 AC135050.7-201ENST00000624508 2218 ntBASIC17.85■□□□□ 0.45
PCDHGA12O60330 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.85■□□□□ 0.45
PCDHGA12O60330 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHGA12O60330 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA12O60330 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHGA12O60330 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHGA12O60330 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHGA12O60330 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms