Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.7■□□□□ 0.1
XRCC2O43543 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
XRCC2O43543 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
XRCC2O43543 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.7■□□□□ 0.1
XRCC2O43543 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.7■□□□□ 0.1
XRCC2O43543 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.7■□□□□ 0.1
XRCC2O43543 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
XRCC2O43543 AC010203.1-204ENST00000548782 407 ntBASIC15.7■□□□□ 0.1
XRCC2O43543 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.7■□□□□ 0.1
XRCC2O43543 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
XRCC2O43543 AC012306.2-201ENST00000609350 630 ntBASIC15.7■□□□□ 0.1
XRCC2O43543 AL023973.1-201ENST00000624619 620 ntBASIC15.7■□□□□ 0.1
XRCC2O43543 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC2O43543 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC2O43543 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC2O43543 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC2O43543 AC012313.1-201ENST00000593393 3059 ntBASIC15.7■□□□□ 0.1
XRCC2O43543 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC2O43543 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.7■□□□□ 0.1
XRCC2O43543 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC2O43543 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC2O43543 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC2O43543 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC2O43543 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC2O43543 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC2O43543 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC2O43543 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.7■□□□□ 0.1
XRCC2O43543 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC2O43543 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC2O43543 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC2O43543 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC2O43543 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
XRCC2O43543 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC2O43543 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC2O43543 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC2O43543 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC2O43543 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC2O43543 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
XRCC2O43543 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
XRCC2O43543 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
XRCC2O43543 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC2O43543 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
XRCC2O43543 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.69■□□□□ 0.1
XRCC2O43543 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
XRCC2O43543 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC2O43543 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC2O43543 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
XRCC2O43543 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC2O43543 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
XRCC2O43543 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
XRCC2O43543 AC020916.1-201ENST00000587762 1774 ntBASIC15.69■□□□□ 0.1
XRCC2O43543 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC2O43543 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC2O43543 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.69■□□□□ 0.1
XRCC2O43543 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.69■□□□□ 0.1
XRCC2O43543 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
XRCC2O43543 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC2O43543 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC2O43543 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC2O43543 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.68■□□□□ 0.1
XRCC2O43543 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC2O43543 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC2O43543 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC2O43543 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.68■□□□□ 0.1
XRCC2O43543 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC2O43543 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC2O43543 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
XRCC2O43543 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.68■□□□□ 0.1
XRCC2O43543 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC2O43543 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
XRCC2O43543 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC2O43543 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
XRCC2O43543 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC2O43543 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
XRCC2O43543 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC2O43543 BX664615.1-201ENST00000443558 458 ntBASIC15.68■□□□□ 0.1
XRCC2O43543 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.68■□□□□ 0.1
XRCC2O43543 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.68■□□□□ 0.1
XRCC2O43543 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.68■□□□□ 0.1
XRCC2O43543 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
XRCC2O43543 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC2O43543 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.68■□□□□ 0.1
XRCC2O43543 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.68■□□□□ 0.1
XRCC2O43543 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC2O43543 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC2O43543 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC2O43543 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC2O43543 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.68■□□□□ 0.1
XRCC2O43543 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
XRCC2O43543 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.68■□□□□ 0.1
XRCC2O43543 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC2O43543 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.67■□□□□ 0.1
XRCC2O43543 GNAS-203ENST00000306120 1878 ntBASIC15.67■□□□□ 0.1
XRCC2O43543 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
XRCC2O43543 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms