Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.91■□□□□ 0.3
RRP8O43159 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.91■□□□□ 0.3
RRP8O43159 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RRP8O43159 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RRP8O43159 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.91■□□□□ 0.3
RRP8O43159 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RRP8O43159 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RRP8O43159 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.91■□□□□ 0.3
RRP8O43159 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RRP8O43159 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.91■□□□□ 0.3
RRP8O43159 CNN2P11-201ENST00000429351 262 ntBASIC16.91■□□□□ 0.3
RRP8O43159 YBX1P5-201ENST00000509441 847 ntBASIC16.91■□□□□ 0.3
RRP8O43159 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.91■□□□□ 0.3
RRP8O43159 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RRP8O43159 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.91■□□□□ 0.3
RRP8O43159 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.91■□□□□ 0.3
RRP8O43159 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.91■□□□□ 0.3
RRP8O43159 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RRP8O43159 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RRP8O43159 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.91■□□□□ 0.3
RRP8O43159 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RRP8O43159 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RRP8O43159 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RRP8O43159 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
RRP8O43159 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RRP8O43159 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.91■□□□□ 0.3
RRP8O43159 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.91■□□□□ 0.3
RRP8O43159 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RRP8O43159 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.9■□□□□ 0.3
RRP8O43159 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
RRP8O43159 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RRP8O43159 AC002310.6-201ENST00000624451 1377 ntBASIC16.9■□□□□ 0.3
RRP8O43159 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.9■□□□□ 0.3
RRP8O43159 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.9■□□□□ 0.3
RRP8O43159 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RRP8O43159 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RRP8O43159 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RRP8O43159 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RRP8O43159 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
RRP8O43159 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RRP8O43159 MIR149-201ENST00000384879 89 ntBASIC16.9■□□□□ 0.3
RRP8O43159 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.9■□□□□ 0.3
RRP8O43159 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RRP8O43159 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.9■□□□□ 0.3
RRP8O43159 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RRP8O43159 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.9■□□□□ 0.3
RRP8O43159 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.9■□□□□ 0.3
RRP8O43159 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RRP8O43159 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.9■□□□□ 0.3
RRP8O43159 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.9■□□□□ 0.3
RRP8O43159 AC006557.2-201ENST00000592985 1240 ntBASIC16.9■□□□□ 0.3
RRP8O43159 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.9■□□□□ 0.3
RRP8O43159 AC106028.4-201ENST00000614509 607 ntBASIC16.9■□□□□ 0.3
RRP8O43159 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.9■□□□□ 0.3
RRP8O43159 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RRP8O43159 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RRP8O43159 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.9■□□□□ 0.3
RRP8O43159 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RRP8O43159 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RRP8O43159 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RRP8O43159 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.9■□□□□ 0.3
RRP8O43159 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.9■□□□□ 0.3
RRP8O43159 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RRP8O43159 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RRP8O43159 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RRP8O43159 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RRP8O43159 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.89■□□□□ 0.3
RRP8O43159 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
RRP8O43159 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.89■□□□□ 0.29
RRP8O43159 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RRP8O43159 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RRP8O43159 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RRP8O43159 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.89■□□□□ 0.29
RRP8O43159 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RRP8O43159 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RRP8O43159 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RRP8O43159 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.89■□□□□ 0.29
RRP8O43159 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.89■□□□□ 0.29
RRP8O43159 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.89■□□□□ 0.29
RRP8O43159 AL035633.1-201ENST00000406139 838 ntBASIC16.89■□□□□ 0.29
RRP8O43159 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
RRP8O43159 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.89■□□□□ 0.29
RRP8O43159 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.89■□□□□ 0.29
RRP8O43159 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.89■□□□□ 0.29
RRP8O43159 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.89■□□□□ 0.29
RRP8O43159 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.89■□□□□ 0.29
RRP8O43159 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.89■□□□□ 0.29
RRP8O43159 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RRP8O43159 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RRP8O43159 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.89■□□□□ 0.29
RRP8O43159 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RRP8O43159 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.89■□□□□ 0.29
RRP8O43159 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RRP8O43159 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RRP8O43159 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RRP8O43159 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RRP8O43159 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RRP8O43159 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RRP8O43159 AC005332.7-201ENST00000614046 2005 ntBASIC16.89■□□□□ 0.29
RRP8O43159 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms