Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CEP290O15078 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CEP290O15078 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CEP290O15078 MIR943-201ENST00000401286 94 ntBASIC19.4■□□□□ 0.7
CEP290O15078 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CEP290O15078 RPS2P32-201ENST00000439199 892 ntBASIC19.4■□□□□ 0.7
CEP290O15078 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.4■□□□□ 0.7
CEP290O15078 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CEP290O15078 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.4■□□□□ 0.7
CEP290O15078 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.4■□□□□ 0.7
CEP290O15078 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CEP290O15078 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.39■□□□□ 0.7
CEP290O15078 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CEP290O15078 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CEP290O15078 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CEP290O15078 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.39■□□□□ 0.7
CEP290O15078 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.39■□□□□ 0.7
CEP290O15078 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CEP290O15078 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CEP290O15078 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CEP290O15078 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CEP290O15078 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CEP290O15078 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CEP290O15078 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.39■□□□□ 0.69
CEP290O15078 AL512356.2-201ENST00000546955 174 ntBASIC19.39■□□□□ 0.69
CEP290O15078 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.39■□□□□ 0.69
CEP290O15078 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.39■□□□□ 0.69
CEP290O15078 AC008687.5-201ENST00000593746 558 ntBASIC19.39■□□□□ 0.69
CEP290O15078 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CEP290O15078 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.39■□□□□ 0.69
CEP290O15078 LINC00565-201ENST00000562710 2331 ntBASIC19.39■□□□□ 0.69
CEP290O15078 AC007375.3-201ENST00000600936 2314 ntBASIC19.39■□□□□ 0.69
CEP290O15078 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CEP290O15078 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CEP290O15078 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CEP290O15078 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CEP290O15078 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CEP290O15078 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CEP290O15078 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.39■□□□□ 0.69
CEP290O15078 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.39■□□□□ 0.69
CEP290O15078 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.39■□□□□ 0.69
CEP290O15078 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.39■□□□□ 0.69
CEP290O15078 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CEP290O15078 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
CEP290O15078 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.38■□□□□ 0.69
CEP290O15078 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.38■□□□□ 0.69
CEP290O15078 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CEP290O15078 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CEP290O15078 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.38■□□□□ 0.69
CEP290O15078 SDHAP2-201ENST00000455183 2001 ntBASIC19.38■□□□□ 0.69
CEP290O15078 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CEP290O15078 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CEP290O15078 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.38■□□□□ 0.69
CEP290O15078 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CEP290O15078 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.38■□□□□ 0.69
CEP290O15078 SERBP1P5-201ENST00000510079 1181 ntBASIC19.38■□□□□ 0.69
CEP290O15078 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.38■□□□□ 0.69
CEP290O15078 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.38■□□□□ 0.69
CEP290O15078 AC023141.13-201ENST00000604991 943 ntBASIC19.38■□□□□ 0.69
CEP290O15078 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CEP290O15078 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CEP290O15078 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CEP290O15078 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CEP290O15078 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
CEP290O15078 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.37■□□□□ 0.69
CEP290O15078 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.37■□□□□ 0.69
CEP290O15078 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.37■□□□□ 0.69
CEP290O15078 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CEP290O15078 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CEP290O15078 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CEP290O15078 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CEP290O15078 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.37■□□□□ 0.69
CEP290O15078 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CEP290O15078 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CEP290O15078 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CEP290O15078 SPDYE21P-201ENST00000413323 827 ntBASIC19.37■□□□□ 0.69
CEP290O15078 AC096633.1-201ENST00000422446 749 ntBASIC19.37■□□□□ 0.69
CEP290O15078 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.37■□□□□ 0.69
CEP290O15078 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.37■□□□□ 0.69
CEP290O15078 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CEP290O15078 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.37■□□□□ 0.69
CEP290O15078 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CEP290O15078 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CEP290O15078 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.37■□□□□ 0.69
CEP290O15078 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CEP290O15078 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.36■□□□□ 0.69
CEP290O15078 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CEP290O15078 U91328.1-201ENST00000437528 223 ntBASIC19.36■□□□□ 0.69
CEP290O15078 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.36■□□□□ 0.69
CEP290O15078 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.36■□□□□ 0.69
CEP290O15078 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CEP290O15078 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CEP290O15078 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CEP290O15078 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CEP290O15078 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CEP290O15078 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CEP290O15078 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CEP290O15078 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CEP290O15078 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CEP290O15078 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms