Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHD2O14647 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
CHD2O14647 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHD2O14647 Z92544.3-201ENST00000624747 417 ntBASIC24.9■■□□□ 1.58
CHD2O14647 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHD2O14647 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CHD2O14647 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHD2O14647 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC24.89■■□□□ 1.58
CHD2O14647 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CHD2O14647 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CHD2O14647 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC24.89■■□□□ 1.58
CHD2O14647 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
CHD2O14647 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
CHD2O14647 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC24.89■■□□□ 1.58
CHD2O14647 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC24.89■■□□□ 1.58
CHD2O14647 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC24.89■■□□□ 1.58
CHD2O14647 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
CHD2O14647 AC093010.1-201ENST00000473625 1624 ntBASIC24.89■■□□□ 1.58
CHD2O14647 SIRPAP1-201ENST00000448467 1770 ntBASIC24.89■■□□□ 1.58
CHD2O14647 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.58
CHD2O14647 AC005082.1-201ENST00000413042 2259 ntBASIC24.89■■□□□ 1.58
CHD2O14647 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC24.89■■□□□ 1.58
CHD2O14647 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHD2O14647 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHD2O14647 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHD2O14647 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHD2O14647 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC24.89■■□□□ 1.57
CHD2O14647 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
CHD2O14647 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHD2O14647 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC24.89■■□□□ 1.57
CHD2O14647 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC24.89■■□□□ 1.57
CHD2O14647 AC009093.7-201ENST00000623853 1223 ntBASIC24.89■■□□□ 1.57
CHD2O14647 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CHD2O14647 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHD2O14647 BCAR1-209ENST00000546196 1340 ntBASIC24.88■■□□□ 1.57
CHD2O14647 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHD2O14647 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC24.88■■□□□ 1.57
CHD2O14647 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHD2O14647 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHD2O14647 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHD2O14647 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
CHD2O14647 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
CHD2O14647 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHD2O14647 SMN2-210ENST00000511812 867 ntTSL 2 BASIC24.88■■□□□ 1.57
CHD2O14647 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CHD2O14647 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC24.88■■□□□ 1.57
CHD2O14647 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CHD2O14647 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC24.87■■□□□ 1.57
CHD2O14647 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC24.87■■□□□ 1.57
CHD2O14647 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC24.87■■□□□ 1.57
CHD2O14647 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHD2O14647 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHD2O14647 CD99-202ENST00000381180 530 ntTSL 2 BASIC24.87■■□□□ 1.57
CHD2O14647 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC24.87■■□□□ 1.57
CHD2O14647 PON3-205ENST00000451904 1053 ntTSL 3 BASIC24.87■■□□□ 1.57
CHD2O14647 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHD2O14647 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC24.87■■□□□ 1.57
CHD2O14647 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
CHD2O14647 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHD2O14647 ME2-218ENST00000640965 2476 ntTSL 5 BASIC24.87■■□□□ 1.57
CHD2O14647 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHD2O14647 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHD2O14647 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHD2O14647 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
CHD2O14647 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHD2O14647 SLBP-205ENST00000488267 987 ntTSL 2 BASIC24.86■■□□□ 1.57
CHD2O14647 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHD2O14647 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC24.86■■□□□ 1.57
CHD2O14647 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
CHD2O14647 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
CHD2O14647 AC093484.2-201ENST00000580996 2166 ntBASIC24.86■■□□□ 1.57
CHD2O14647 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
CHD2O14647 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC24.86■■□□□ 1.57
CHD2O14647 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CHD2O14647 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHD2O14647 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHD2O14647 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHD2O14647 AC244107.1-201ENST00000442033 332 ntBASIC24.86■■□□□ 1.57
CHD2O14647 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC24.86■■□□□ 1.57
CHD2O14647 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHD2O14647 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC24.86■■□□□ 1.57
CHD2O14647 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHD2O14647 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC24.86■■□□□ 1.57
CHD2O14647 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC24.86■■□□□ 1.57
CHD2O14647 AC096734.2-201ENST00000562054 433 ntBASIC24.86■■□□□ 1.57
CHD2O14647 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC24.86■■□□□ 1.57
CHD2O14647 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHD2O14647 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC24.85■■□□□ 1.57
CHD2O14647 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC24.85■■□□□ 1.57
CHD2O14647 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC24.85■■□□□ 1.57
CHD2O14647 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHD2O14647 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC24.85■■□□□ 1.57
CHD2O14647 AC019129.2-201ENST00000609837 1235 ntBASIC24.85■■□□□ 1.57
CHD2O14647 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHD2O14647 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHD2O14647 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHD2O14647 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHD2O14647 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHD2O14647 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC24.84■■□□□ 1.57
CHD2O14647 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms