Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.51■□□□□ 0.39
UBFD1O14562 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
UBFD1O14562 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.51■□□□□ 0.39
UBFD1O14562 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
UBFD1O14562 MIR3917-201ENST00000580971 93 ntBASIC17.51■□□□□ 0.39
UBFD1O14562 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.51■□□□□ 0.39
UBFD1O14562 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.51■□□□□ 0.39
UBFD1O14562 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBFD1O14562 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBFD1O14562 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.51■□□□□ 0.39
UBFD1O14562 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBFD1O14562 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBFD1O14562 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBFD1O14562 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.51■□□□□ 0.39
UBFD1O14562 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
UBFD1O14562 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBFD1O14562 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBFD1O14562 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBFD1O14562 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
UBFD1O14562 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBFD1O14562 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.5■□□□□ 0.39
UBFD1O14562 AC099398.1-201ENST00000567919 2776 ntBASIC17.5■□□□□ 0.39
UBFD1O14562 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
UBFD1O14562 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBFD1O14562 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.5■□□□□ 0.39
UBFD1O14562 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBFD1O14562 ECEL1P2-202ENST00000465689 757 ntBASIC17.5■□□□□ 0.39
UBFD1O14562 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.5■□□□□ 0.39
UBFD1O14562 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.5■□□□□ 0.39
UBFD1O14562 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.5■□□□□ 0.39
UBFD1O14562 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.5■□□□□ 0.39
UBFD1O14562 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBFD1O14562 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.5■□□□□ 0.39
UBFD1O14562 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBFD1O14562 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBFD1O14562 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBFD1O14562 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBFD1O14562 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.5■□□□□ 0.39
UBFD1O14562 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBFD1O14562 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.5■□□□□ 0.39
UBFD1O14562 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.5■□□□□ 0.39
UBFD1O14562 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBFD1O14562 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.5■□□□□ 0.39
UBFD1O14562 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.49■□□□□ 0.39
UBFD1O14562 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBFD1O14562 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.49■□□□□ 0.39
UBFD1O14562 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBFD1O14562 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBFD1O14562 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBFD1O14562 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBFD1O14562 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.49■□□□□ 0.39
UBFD1O14562 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.49■□□□□ 0.39
UBFD1O14562 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBFD1O14562 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBFD1O14562 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBFD1O14562 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBFD1O14562 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.49■□□□□ 0.39
UBFD1O14562 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBFD1O14562 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
UBFD1O14562 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.49■□□□□ 0.39
UBFD1O14562 AC128688.1-201ENST00000487626 519 ntBASIC17.49■□□□□ 0.39
UBFD1O14562 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBFD1O14562 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.49■□□□□ 0.39
UBFD1O14562 MIR4497-201ENST00000583208 89 ntBASIC17.49■□□□□ 0.39
UBFD1O14562 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.49■□□□□ 0.39
UBFD1O14562 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
UBFD1O14562 AP006294.2-201ENST00000641667 209 ntBASIC17.49■□□□□ 0.39
UBFD1O14562 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBFD1O14562 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBFD1O14562 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBFD1O14562 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBFD1O14562 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBFD1O14562 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
UBFD1O14562 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.49■□□□□ 0.39
UBFD1O14562 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.49■□□□□ 0.39
UBFD1O14562 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.49■□□□□ 0.39
UBFD1O14562 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
UBFD1O14562 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBFD1O14562 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
UBFD1O14562 AC133963.1-201ENST00000504166 1679 ntBASIC17.48■□□□□ 0.39
UBFD1O14562 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
UBFD1O14562 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UBFD1O14562 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
UBFD1O14562 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBFD1O14562 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBFD1O14562 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBFD1O14562 AC022211.2-201ENST00000585075 2527 ntBASIC17.48■□□□□ 0.39
UBFD1O14562 LINC00602-201ENST00000629776 2065 ntBASIC17.48■□□□□ 0.39
UBFD1O14562 AP001094.4-201ENST00000579008 2176 ntBASIC17.48■□□□□ 0.39
UBFD1O14562 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBFD1O14562 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBFD1O14562 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBFD1O14562 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBFD1O14562 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UBFD1O14562 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.48■□□□□ 0.39
UBFD1O14562 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.48■□□□□ 0.39
UBFD1O14562 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBFD1O14562 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBFD1O14562 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.48■□□□□ 0.39
UBFD1O14562 NAPSB-206ENST00000562112 1266 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms