Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17■□□□□ 0.31
CLDN4O14493 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
CLDN4O14493 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 BICD1-207ENST00000551848 1962 ntBASIC17■□□□□ 0.31
CLDN4O14493 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
CLDN4O14493 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 ABALON-201ENST00000629058 1903 ntBASIC17■□□□□ 0.31
CLDN4O14493 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN4O14493 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN4O14493 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN4O14493 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN4O14493 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN4O14493 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CLDN4O14493 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN4O14493 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN4O14493 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN4O14493 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CLDN4O14493 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN4O14493 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN4O14493 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN4O14493 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN4O14493 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN4O14493 UPK3BP1-201ENST00000428678 509 ntBASIC16.99■□□□□ 0.31
CLDN4O14493 CHCHD2P8-201ENST00000429873 447 ntBASIC16.99■□□□□ 0.31
CLDN4O14493 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.99■□□□□ 0.31
CLDN4O14493 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN4O14493 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN4O14493 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN4O14493 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN4O14493 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN4O14493 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN4O14493 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CLDN4O14493 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN4O14493 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN4O14493 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN4O14493 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN4O14493 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CLDN4O14493 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CLDN4O14493 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.98■□□□□ 0.31
CLDN4O14493 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN4O14493 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN4O14493 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CLDN4O14493 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN4O14493 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CLDN4O14493 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.98■□□□□ 0.31
CLDN4O14493 LINC00167-201ENST00000530583 1419 ntBASIC16.98■□□□□ 0.31
CLDN4O14493 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CLDN4O14493 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CLDN4O14493 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.98■□□□□ 0.31
CLDN4O14493 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN4O14493 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN4O14493 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN4O14493 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN4O14493 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN4O14493 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN4O14493 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN4O14493 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.98■□□□□ 0.31
CLDN4O14493 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.98■□□□□ 0.31
CLDN4O14493 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN4O14493 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.98■□□□□ 0.31
CLDN4O14493 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN4O14493 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN4O14493 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CLDN4O14493 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN4O14493 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN4O14493 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN4O14493 AC016734.2-201ENST00000624325 1377 ntBASIC16.98■□□□□ 0.31
CLDN4O14493 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN4O14493 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN4O14493 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CLDN4O14493 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN4O14493 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN4O14493 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN4O14493 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN4O14493 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN4O14493 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CLDN4O14493 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN4O14493 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN4O14493 REXO1L9P-201ENST00000604264 2108 ntBASIC16.97■□□□□ 0.31
CLDN4O14493 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN4O14493 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN4O14493 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN4O14493 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN4O14493 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN4O14493 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN4O14493 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN4O14493 DUTP2-201ENST00000519164 463 ntBASIC16.97■□□□□ 0.31
CLDN4O14493 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN4O14493 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CLDN4O14493 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN4O14493 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CLDN4O14493 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN4O14493 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN4O14493 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN4O14493 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN4O14493 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms