Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM38O00635 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM38O00635 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM38O00635 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM38O00635 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM38O00635 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM38O00635 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM38O00635 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM38O00635 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM38O00635 AC073592.3-201ENST00000625118 1834 ntBASIC18.16■□□□□ 0.5
TRIM38O00635 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
TRIM38O00635 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM38O00635 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM38O00635 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM38O00635 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM38O00635 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM38O00635 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TRIM38O00635 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TRIM38O00635 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRIM38O00635 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM38O00635 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM38O00635 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM38O00635 TPSP2-201ENST00000561760 610 ntBASIC18.16■□□□□ 0.5
TRIM38O00635 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRIM38O00635 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM38O00635 AC010240.3-201ENST00000607688 395 ntBASIC18.16■□□□□ 0.5
TRIM38O00635 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM38O00635 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM38O00635 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM38O00635 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
TRIM38O00635 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM38O00635 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRIM38O00635 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM38O00635 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM38O00635 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM38O00635 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRIM38O00635 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM38O00635 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM38O00635 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM38O00635 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM38O00635 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM38O00635 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM38O00635 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRIM38O00635 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM38O00635 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.15■□□□□ 0.5
TRIM38O00635 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM38O00635 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM38O00635 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM38O00635 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM38O00635 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM38O00635 LINC00265-3P-201ENST00000447588 903 ntBASIC18.15■□□□□ 0.5
TRIM38O00635 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM38O00635 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.15■□□□□ 0.5
TRIM38O00635 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM38O00635 AC104390.1-201ENST00000555663 520 ntBASIC18.15■□□□□ 0.5
TRIM38O00635 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM38O00635 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM38O00635 IFNL4P1-201ENST00000607083 540 ntBASIC18.15■□□□□ 0.5
TRIM38O00635 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM38O00635 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM38O00635 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRIM38O00635 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRIM38O00635 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM38O00635 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM38O00635 BCL2-203ENST00000589955 5011 ntBASIC18.15■□□□□ 0.5
TRIM38O00635 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM38O00635 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRIM38O00635 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.15■□□□□ 0.5
TRIM38O00635 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM38O00635 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM38O00635 HOXB1-202ENST00000577092 1414 ntBASIC18.15■□□□□ 0.5
TRIM38O00635 AC008764.6-201ENST00000595909 2069 ntBASIC18.14■□□□□ 0.5
TRIM38O00635 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRIM38O00635 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRIM38O00635 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM38O00635 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM38O00635 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM38O00635 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM38O00635 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM38O00635 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM38O00635 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM38O00635 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM38O00635 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM38O00635 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM38O00635 TSPY19P-201ENST00000418461 509 ntBASIC18.14■□□□□ 0.49
TRIM38O00635 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM38O00635 DRAXINP1-201ENST00000437611 948 ntBASIC18.14■□□□□ 0.49
TRIM38O00635 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM38O00635 TSPY18P-201ENST00000441642 509 ntBASIC18.14■□□□□ 0.49
TRIM38O00635 FAAHP1-202ENST00000446499 1238 ntBASIC18.14■□□□□ 0.49
TRIM38O00635 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM38O00635 AP000867.3-201ENST00000524675 377 ntBASIC18.14■□□□□ 0.49
TRIM38O00635 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM38O00635 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM38O00635 AL732292.2-201ENST00000609649 430 ntBASIC18.14■□□□□ 0.49
TRIM38O00635 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM38O00635 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM38O00635 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM38O00635 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM38O00635 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms