Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC005363.2-201ENST00000618631 242 ntBASIC17.12■□□□□ 0.33
UPK1AO00322 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.12■□□□□ 0.33
UPK1AO00322 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
UPK1AO00322 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1AO00322 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1AO00322 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1AO00322 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1AO00322 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1AO00322 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
UPK1AO00322 PHGDH-209ENST00000641074 1780 ntBASIC17.12■□□□□ 0.33
UPK1AO00322 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1AO00322 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
UPK1AO00322 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPK1AO00322 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
UPK1AO00322 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
UPK1AO00322 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.11■□□□□ 0.33
UPK1AO00322 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 AC113347.1-201ENST00000413321 391 ntBASIC17.11■□□□□ 0.33
UPK1AO00322 AC211429.1-201ENST00000415277 523 ntBASIC17.11■□□□□ 0.33
UPK1AO00322 LIN28AP1-201ENST00000429574 405 ntBASIC17.11■□□□□ 0.33
UPK1AO00322 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.11■□□□□ 0.33
UPK1AO00322 MIR3917-201ENST00000580971 93 ntBASIC17.11■□□□□ 0.33
UPK1AO00322 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.11■□□□□ 0.33
UPK1AO00322 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.11■□□□□ 0.33
UPK1AO00322 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK1AO00322 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.1■□□□□ 0.33
UPK1AO00322 LINC01126-201ENST00000623515 1646 ntBASIC17.1■□□□□ 0.33
UPK1AO00322 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.1■□□□□ 0.33
UPK1AO00322 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1AO00322 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
UPK1AO00322 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1AO00322 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.1■□□□□ 0.33
UPK1AO00322 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1AO00322 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.1■□□□□ 0.33
UPK1AO00322 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.1■□□□□ 0.33
UPK1AO00322 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.1■□□□□ 0.33
UPK1AO00322 ATP5G1P1-201ENST00000448724 379 ntBASIC17.1■□□□□ 0.33
UPK1AO00322 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.1■□□□□ 0.33
UPK1AO00322 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
UPK1AO00322 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.1■□□□□ 0.33
UPK1AO00322 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.1■□□□□ 0.33
UPK1AO00322 AC092865.7-201ENST00000641832 219 ntBASIC17.1■□□□□ 0.33
UPK1AO00322 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1AO00322 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.1■□□□□ 0.33
UPK1AO00322 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1AO00322 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
UPK1AO00322 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
UPK1AO00322 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.1■□□□□ 0.33
UPK1AO00322 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.1■□□□□ 0.33
UPK1AO00322 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPK1AO00322 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK1AO00322 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
UPK1AO00322 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK1AO00322 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UPK1AO00322 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.09■□□□□ 0.33
UPK1AO00322 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK1AO00322 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.09■□□□□ 0.33
UPK1AO00322 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK1AO00322 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK1AO00322 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
UPK1AO00322 TERF1P1-201ENST00000311003 1181 ntBASIC17.09■□□□□ 0.33
UPK1AO00322 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK1AO00322 AL137013.1-201ENST00000432946 1228 ntBASIC17.09■□□□□ 0.33
UPK1AO00322 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.09■□□□□ 0.33
UPK1AO00322 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK1AO00322 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.09■□□□□ 0.33
UPK1AO00322 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.09■□□□□ 0.33
UPK1AO00322 GCSHP2-201ENST00000560971 527 ntBASIC17.09■□□□□ 0.33
UPK1AO00322 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.09■□□□□ 0.33
UPK1AO00322 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.09■□□□□ 0.33
UPK1AO00322 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
UPK1AO00322 AL023973.1-201ENST00000624619 620 ntBASIC17.09■□□□□ 0.33
UPK1AO00322 AC073508.3-201ENST00000619697 1419 ntBASIC17.09■□□□□ 0.33
UPK1AO00322 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.09■□□□□ 0.33
UPK1AO00322 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
UPK1AO00322 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UPK1AO00322 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK1AO00322 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK1AO00322 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.09■□□□□ 0.33
UPK1AO00322 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms