Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.22■□□□□ 0.35
PDLIM1O00151 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.22■□□□□ 0.35
PDLIM1O00151 C1QL1P1-201ENST00000568105 661 ntBASIC17.22■□□□□ 0.35
PDLIM1O00151 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.22■□□□□ 0.35
PDLIM1O00151 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.22■□□□□ 0.35
PDLIM1O00151 AL353708.3-201ENST00000610272 989 ntBASIC17.22■□□□□ 0.35
PDLIM1O00151 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.22■□□□□ 0.35
PDLIM1O00151 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.22■□□□□ 0.35
PDLIM1O00151 KRT8P32-201ENST00000512863 1461 ntBASIC17.22■□□□□ 0.35
PDLIM1O00151 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.22■□□□□ 0.35
PDLIM1O00151 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDLIM1O00151 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PDLIM1O00151 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM1O00151 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.21■□□□□ 0.35
PDLIM1O00151 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM1O00151 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM1O00151 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PDLIM1O00151 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM1O00151 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.21■□□□□ 0.35
PDLIM1O00151 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM1O00151 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM1O00151 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM1O00151 MIR718-201ENST00000390190 70 ntBASIC17.21■□□□□ 0.35
PDLIM1O00151 AL353807.1-201ENST00000427475 662 ntBASIC17.21■□□□□ 0.35
PDLIM1O00151 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.21■□□□□ 0.35
PDLIM1O00151 RPS2P4-201ENST00000476944 856 ntBASIC17.21■□□□□ 0.35
PDLIM1O00151 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM1O00151 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
PDLIM1O00151 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM1O00151 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.21■□□□□ 0.35
PDLIM1O00151 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.21■□□□□ 0.35
PDLIM1O00151 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM1O00151 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.21■□□□□ 0.35
PDLIM1O00151 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM1O00151 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PDLIM1O00151 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.21■□□□□ 0.35
PDLIM1O00151 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDLIM1O00151 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
PDLIM1O00151 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PDLIM1O00151 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PDLIM1O00151 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.2■□□□□ 0.34
PDLIM1O00151 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM1O00151 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.2■□□□□ 0.34
PDLIM1O00151 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM1O00151 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.2■□□□□ 0.34
PDLIM1O00151 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM1O00151 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PDLIM1O00151 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
PDLIM1O00151 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM1O00151 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM1O00151 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM1O00151 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.2■□□□□ 0.34
PDLIM1O00151 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM1O00151 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM1O00151 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PDLIM1O00151 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.2■□□□□ 0.34
PDLIM1O00151 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.2■□□□□ 0.34
PDLIM1O00151 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.2■□□□□ 0.34
PDLIM1O00151 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM1O00151 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.2■□□□□ 0.34
PDLIM1O00151 AF186192.3-201ENST00000583427 947 ntBASIC17.2■□□□□ 0.34
PDLIM1O00151 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.2■□□□□ 0.34
PDLIM1O00151 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM1O00151 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.2■□□□□ 0.34
PDLIM1O00151 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM1O00151 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.2■□□□□ 0.34
PDLIM1O00151 AL121761.2-201ENST00000598007 1648 ntBASIC17.2■□□□□ 0.34
PDLIM1O00151 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.2■□□□□ 0.34
PDLIM1O00151 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PDLIM1O00151 AL096828.2-201ENST00000567259 1965 ntBASIC17.2■□□□□ 0.34
PDLIM1O00151 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM1O00151 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.2■□□□□ 0.34
PDLIM1O00151 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM1O00151 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDLIM1O00151 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.2■□□□□ 0.34
PDLIM1O00151 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.2■□□□□ 0.34
PDLIM1O00151 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.2■□□□□ 0.34
PDLIM1O00151 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM1O00151 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM1O00151 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM1O00151 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM1O00151 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.19■□□□□ 0.34
PDLIM1O00151 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM1O00151 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PDLIM1O00151 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.19■□□□□ 0.34
PDLIM1O00151 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM1O00151 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM1O00151 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PDLIM1O00151 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.19■□□□□ 0.34
PDLIM1O00151 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PDLIM1O00151 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM1O00151 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDLIM1O00151 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms