Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.89■□□□□ 0.77
TRIM49BA6NDI0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TRIM49BA6NDI0 AL441883.1-201ENST00000566170 1045 ntBASIC19.89■□□□□ 0.77
TRIM49BA6NDI0 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.89■□□□□ 0.77
TRIM49BA6NDI0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.89■□□□□ 0.77
TRIM49BA6NDI0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM49BA6NDI0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM49BA6NDI0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.89■□□□□ 0.77
TRIM49BA6NDI0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 AL355312.1-201ENST00000407115 2176 ntBASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 AP000523.1-201ENST00000398242 1049 ntBASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 AC133561.5-201ENST00000635547 218 ntBASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 AL645608.8-201ENST00000606034 2086 ntBASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM49BA6NDI0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRIM49BA6NDI0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 SPDYE15P-201ENST00000424157 909 ntBASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 RASA4DP-201ENST00000460726 1199 ntBASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 AC012306.2-201ENST00000609350 630 ntBASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM49BA6NDI0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM49BA6NDI0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM49BA6NDI0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM49BA6NDI0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
TRIM49BA6NDI0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.85■□□□□ 0.77
TRIM49BA6NDI0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TRIM49BA6NDI0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms