Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 AL590627.1-203ENST00000421194 1026 ntBASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 RNA5SP419-201ENST00000515908 135 ntBASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1G3Q9Y6M4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.64■□□□□ 0.42
CSNK1G3Q9Y6M4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CSNK1G3Q9Y6M4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CSNK1G3Q9Y6M4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CSNK1G3Q9Y6M4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.42
CSNK1G3Q9Y6M4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CSNK1G3Q9Y6M4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
CSNK1G3Q9Y6M4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 AC011467.2-201ENST00000598425 242 ntBASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 AC120114.3-201ENST00000611923 658 ntBASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 AL355877.3-201ENST00000622820 899 ntBASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 AC125634.1-201ENST00000438758 1403 ntBASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CSNK1G3Q9Y6M4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 NEFHP1-201ENST00000412845 2629 ntBASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 AL031284.1-201ENST00000419297 478 ntBASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 LINC00602-201ENST00000629776 2065 ntBASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CSNK1G3Q9Y6M4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms