Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 HLA-B-256ENST00000639848 1089 ntBASIC16.13■□□□□ 0.17
SSR3Q9UNL2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 CROCCP2-202ENST00000412962 2773 ntBASIC16.13■□□□□ 0.17
SSR3Q9UNL2 AC046158.3-201ENST00000624947 2558 ntBASIC16.13■□□□□ 0.17
SSR3Q9UNL2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSR3Q9UNL2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.12■□□□□ 0.17
SSR3Q9UNL2 Z85996.1-201ENST00000494644 937 ntBASIC16.12■□□□□ 0.17
SSR3Q9UNL2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SSR3Q9UNL2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.11■□□□□ 0.17
SSR3Q9UNL2 PRKY-204ENST00000533551 1019 ntBASIC16.11■□□□□ 0.17
SSR3Q9UNL2 PNMA6B-201ENST00000538162 1200 ntBASIC16.11■□□□□ 0.17
SSR3Q9UNL2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 AC004264.1-201ENST00000608354 794 ntBASIC16.11■□□□□ 0.17
SSR3Q9UNL2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SSR3Q9UNL2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms