Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SALL4Q9UJQ4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SALL4Q9UJQ4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SALL4Q9UJQ4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SALL4Q9UJQ4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SALL4Q9UJQ4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SALL4Q9UJQ4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SALL4Q9UJQ4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.19■□□□□ 0.66
SALL4Q9UJQ4 KRT18P22-201ENST00000402024 1347 ntBASIC19.19■□□□□ 0.66
SALL4Q9UJQ4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SALL4Q9UJQ4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SALL4Q9UJQ4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SALL4Q9UJQ4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 AL390955.1-201ENST00000428694 934 ntBASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 TSPY17P-201ENST00000450329 467 ntBASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 AC112497.1-201ENST00000624824 639 ntBASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SALL4Q9UJQ4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 AC007663.1-201ENST00000438948 1240 ntBASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 AC010947.1-201ENST00000623454 693 ntBASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 AD000864.1-201ENST00000624076 2295 ntBASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 AC084018.2-201ENST00000613093 2607 ntBASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL4Q9UJQ4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SALL4Q9UJQ4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SALL4Q9UJQ4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.16■□□□□ 0.66
SALL4Q9UJQ4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SALL4Q9UJQ4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SALL4Q9UJQ4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
SALL4Q9UJQ4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.16■□□□□ 0.66
SALL4Q9UJQ4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SALL4Q9UJQ4 AL023806.1-201ENST00000603994 1649 ntBASIC19.16■□□□□ 0.66
SALL4Q9UJQ4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SALL4Q9UJQ4 INGX-201ENST00000359239 846 ntBASIC19.16■□□□□ 0.66
SALL4Q9UJQ4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.16■□□□□ 0.66
SALL4Q9UJQ4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.16■□□□□ 0.66
SALL4Q9UJQ4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.16■□□□□ 0.66
SALL4Q9UJQ4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.16■□□□□ 0.66
SALL4Q9UJQ4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.16■□□□□ 0.66
SALL4Q9UJQ4 MIR3180-4-201ENST00000582223 153 ntBASIC19.16■□□□□ 0.66
SALL4Q9UJQ4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SALL4Q9UJQ4 AC010240.3-201ENST00000607688 395 ntBASIC19.16■□□□□ 0.66
SALL4Q9UJQ4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms