Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.04■□□□□ 0.64
SMARCAL1Q9NZC9 FAM197Y1-201ENST00000421178 764 ntBASIC19.04■□□□□ 0.64
SMARCAL1Q9NZC9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.04■□□□□ 0.64
SMARCAL1Q9NZC9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCAL1Q9NZC9 AC107956.1-201ENST00000494359 873 ntBASIC19.04■□□□□ 0.64
SMARCAL1Q9NZC9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.04■□□□□ 0.64
SMARCAL1Q9NZC9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.04■□□□□ 0.64
SMARCAL1Q9NZC9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCAL1Q9NZC9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.04■□□□□ 0.64
SMARCAL1Q9NZC9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
SMARCAL1Q9NZC9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.04■□□□□ 0.64
SMARCAL1Q9NZC9 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.04■□□□□ 0.64
SMARCAL1Q9NZC9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.04■□□□□ 0.64
SMARCAL1Q9NZC9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCAL1Q9NZC9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.04■□□□□ 0.64
SMARCAL1Q9NZC9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SMARCAL1Q9NZC9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMARCAL1Q9NZC9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 MFAP1P1-201ENST00000442257 1255 ntBASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 CROCCP2-202ENST00000412962 2773 ntBASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMARCAL1Q9NZC9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SMARCAL1Q9NZC9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCAL1Q9NZC9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SMARCAL1Q9NZC9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCAL1Q9NZC9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCAL1Q9NZC9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCAL1Q9NZC9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCAL1Q9NZC9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SMARCAL1Q9NZC9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCAL1Q9NZC9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCAL1Q9NZC9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.02■□□□□ 0.64
SMARCAL1Q9NZC9 MIR3180-5-201ENST00000583743 153 ntBASIC19.02■□□□□ 0.64
SMARCAL1Q9NZC9 Z99916.2-201ENST00000604037 246 ntBASIC19.02■□□□□ 0.64
SMARCAL1Q9NZC9 CD177P1-201ENST00000606252 935 ntBASIC19.02■□□□□ 0.64
SMARCAL1Q9NZC9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCAL1Q9NZC9 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCAL1Q9NZC9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCAL1Q9NZC9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMARCAL1Q9NZC9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.02■□□□□ 0.64
SMARCAL1Q9NZC9 AC096733.2-201ENST00000609937 1394 ntBASIC19.02■□□□□ 0.64
SMARCAL1Q9NZC9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMARCAL1Q9NZC9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
SMARCAL1Q9NZC9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
SMARCAL1Q9NZC9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMARCAL1Q9NZC9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMARCAL1Q9NZC9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.02■□□□□ 0.63
SMARCAL1Q9NZC9 UBALD1-205ENST00000590891 2641 ntBASIC19.02■□□□□ 0.63
SMARCAL1Q9NZC9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMARCAL1Q9NZC9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 AC012618.2-201ENST00000428058 849 ntBASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.01■□□□□ 0.63
SMARCAL1Q9NZC9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms