Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 CCR12P-201ENST00000446203 998 ntBASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 DUTP2-201ENST00000519164 463 ntBASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 AC112497.1-201ENST00000624824 639 ntBASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOMER3Q9NSC5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 BX088651.1-201ENST00000540551 451 ntBASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 AC026471.5-201ENST00000615068 467 ntBASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HOMER3Q9NSC5 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 AC099343.3-201ENST00000605834 2503 ntBASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 AL024508.2-201ENST00000607749 1894 ntBASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOMER3Q9NSC5 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOMER3Q9NSC5 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms