Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 RBM17P1-201ENST00000453646 1190 ntBASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 BX088651.1-201ENST00000540551 451 ntBASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC52A3Q9NQ40 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC52A3Q9NQ40 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SLC52A3Q9NQ40 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SLC52A3Q9NQ40 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.08■□□□□ 0.33
SLC52A3Q9NQ40 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.08■□□□□ 0.33
SLC52A3Q9NQ40 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SLC52A3Q9NQ40 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SLC52A3Q9NQ40 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC52A3Q9NQ40 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC52A3Q9NQ40 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC52A3Q9NQ40 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.08■□□□□ 0.32
SLC52A3Q9NQ40 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.08■□□□□ 0.32
SLC52A3Q9NQ40 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC52A3Q9NQ40 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.08■□□□□ 0.32
SLC52A3Q9NQ40 AP003071.4-201ENST00000562276 1284 ntBASIC17.08■□□□□ 0.32
SLC52A3Q9NQ40 AC142381.4-202ENST00000563973 229 ntBASIC17.08■□□□□ 0.32
SLC52A3Q9NQ40 AP001412.1-201ENST00000608405 714 ntBASIC17.08■□□□□ 0.32
SLC52A3Q9NQ40 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC52A3Q9NQ40 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC52A3Q9NQ40 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC52A3Q9NQ40 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SLC52A3Q9NQ40 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC52A3Q9NQ40 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC52A3Q9NQ40 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC52A3Q9NQ40 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SLC52A3Q9NQ40 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 UBE2SP1-201ENST00000450587 669 ntBASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SLC52A3Q9NQ40 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 AC009949.1-201ENST00000623048 1830 ntBASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 GCSHP5-201ENST00000443090 522 ntBASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 FITM1-202ENST00000559294 800 ntBASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 Z99916.2-201ENST00000604037 246 ntBASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 LINC01451-201ENST00000623792 534 ntBASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 TNRC18P3-201ENST00000441896 2691 ntBASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC52A3Q9NQ40 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms