Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RNF41Q9H4P4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RNF41Q9H4P4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RNF41Q9H4P4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF41Q9H4P4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF41Q9H4P4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF41Q9H4P4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF41Q9H4P4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF41Q9H4P4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF41Q9H4P4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF41Q9H4P4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF41Q9H4P4 HCG4P8-203ENST00000443049 980 ntBASIC21.26■□□□□ 0.99
RNF41Q9H4P4 LINC00265-3P-201ENST00000447588 903 ntBASIC21.26■□□□□ 0.99
RNF41Q9H4P4 TOB2P1-201ENST00000469761 992 ntBASIC21.26■□□□□ 0.99
RNF41Q9H4P4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF41Q9H4P4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.26■□□□□ 0.99
RNF41Q9H4P4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF41Q9H4P4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF41Q9H4P4 AC138028.4-201ENST00000564984 1845 ntBASIC21.26■□□□□ 0.99
RNF41Q9H4P4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RNF41Q9H4P4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
RNF41Q9H4P4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF41Q9H4P4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF41Q9H4P4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RNF41Q9H4P4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.26■□□□□ 0.99
RNF41Q9H4P4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF41Q9H4P4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 AL845331.1-201ENST00000424978 1190 ntBASIC21.25■□□□□ 0.99
RNF41Q9H4P4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 Z69720.1-201ENST00000601483 472 ntBASIC21.25■□□□□ 0.99
RNF41Q9H4P4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.25■□□□□ 0.99
RNF41Q9H4P4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF41Q9H4P4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 AC233702.3-201ENST00000578656 1387 ntBASIC21.24■□□□□ 0.99
RNF41Q9H4P4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF41Q9H4P4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.23■□□□□ 0.99
RNF41Q9H4P4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms