Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.97■□□□□ 0.15
MMP28Q9H239 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.97■□□□□ 0.15
MMP28Q9H239 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
MMP28Q9H239 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 RPS2P4-201ENST00000476944 856 ntBASIC15.97■□□□□ 0.15
MMP28Q9H239 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.97■□□□□ 0.15
MMP28Q9H239 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.97■□□□□ 0.15
MMP28Q9H239 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.97■□□□□ 0.15
MMP28Q9H239 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.97■□□□□ 0.15
MMP28Q9H239 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.97■□□□□ 0.15
MMP28Q9H239 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 FLJ13224-201ENST00000313737 1514 ntBASIC15.97■□□□□ 0.15
MMP28Q9H239 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.97■□□□□ 0.15
MMP28Q9H239 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.97■□□□□ 0.15
MMP28Q9H239 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
MMP28Q9H239 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
MMP28Q9H239 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
MMP28Q9H239 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MMP28Q9H239 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP28Q9H239 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MMP28Q9H239 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MMP28Q9H239 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP28Q9H239 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP28Q9H239 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.96■□□□□ 0.15
MMP28Q9H239 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP28Q9H239 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.96■□□□□ 0.15
MMP28Q9H239 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP28Q9H239 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.96■□□□□ 0.15
MMP28Q9H239 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP28Q9H239 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.96■□□□□ 0.15
MMP28Q9H239 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.96■□□□□ 0.15
MMP28Q9H239 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.96■□□□□ 0.15
MMP28Q9H239 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
MMP28Q9H239 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.96■□□□□ 0.15
MMP28Q9H239 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MMP28Q9H239 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
MMP28Q9H239 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP28Q9H239 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.96■□□□□ 0.15
MMP28Q9H239 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP28Q9H239 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP28Q9H239 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.96■□□□□ 0.15
MMP28Q9H239 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
MMP28Q9H239 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.96■□□□□ 0.15
MMP28Q9H239 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.96■□□□□ 0.15
MMP28Q9H239 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.96■□□□□ 0.15
MMP28Q9H239 MTDHP1-201ENST00000605323 784 ntBASIC15.96■□□□□ 0.15
MMP28Q9H239 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.96■□□□□ 0.15
MMP28Q9H239 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.96■□□□□ 0.15
MMP28Q9H239 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP28Q9H239 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
MMP28Q9H239 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
MMP28Q9H239 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP28Q9H239 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP28Q9H239 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MMP28Q9H239 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
MMP28Q9H239 DOC2GP-204ENST00000639052 2548 ntBASIC15.96■□□□□ 0.14
MMP28Q9H239 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
MMP28Q9H239 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
MMP28Q9H239 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
MMP28Q9H239 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.14
MMP28Q9H239 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
MMP28Q9H239 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
MMP28Q9H239 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.95■□□□□ 0.14
MMP28Q9H239 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
MMP28Q9H239 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP28Q9H239 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP28Q9H239 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MMP28Q9H239 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP28Q9H239 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP28Q9H239 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MMP28Q9H239 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.95■□□□□ 0.14
MMP28Q9H239 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP28Q9H239 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MMP28Q9H239 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP28Q9H239 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP28Q9H239 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP28Q9H239 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP28Q9H239 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MMP28Q9H239 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
MMP28Q9H239 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MMP28Q9H239 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms