Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 AGGF1P2-201ENST00000426656 2106 ntBASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 AL355994.1-201ENST00000424379 260 ntBASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 MFAP1P1-201ENST00000442257 1255 ntBASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 ADM-205ENST00000528544 586 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 AC018695.7-201ENST00000624587 2492 ntBASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP3-1Q9BYR8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 HLA-L-209ENST00000420110 1011 ntBASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC9.15□□□□□ -0.94
KRTAP3-1Q9BYR8 SAPCD2P4-201ENST00000424595 1171 ntBASIC9.15□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms