Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC3Q9BY71 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.8■□□□□ 0.6
LRRC3Q9BY71 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.8■□□□□ 0.6
LRRC3Q9BY71 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRC3Q9BY71 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC3Q9BY71 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.8■□□□□ 0.6
LRRC3Q9BY71 SLC25A1P1-201ENST00000528351 927 ntBASIC18.8■□□□□ 0.6
LRRC3Q9BY71 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRC3Q9BY71 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.8■□□□□ 0.6
LRRC3Q9BY71 AL049840.3-201ENST00000602669 611 ntBASIC18.8■□□□□ 0.6
LRRC3Q9BY71 AC023511.2-201ENST00000618803 211 ntBASIC18.8■□□□□ 0.6
LRRC3Q9BY71 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRC3Q9BY71 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC3Q9BY71 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRC3Q9BY71 AP005117.1-201ENST00000584346 1413 ntBASIC18.8■□□□□ 0.6
LRRC3Q9BY71 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
LRRC3Q9BY71 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC3Q9BY71 GMCL1P1-201ENST00000463439 1581 ntBASIC18.8■□□□□ 0.6
LRRC3Q9BY71 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRC3Q9BY71 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC3Q9BY71 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC3Q9BY71 AC243591.1-201ENST00000452967 1364 ntBASIC18.8■□□□□ 0.6
LRRC3Q9BY71 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 ABCD1P5-201ENST00000445663 754 ntBASIC18.79■□□□□ 0.6
LRRC3Q9BY71 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 MIR7706-201ENST00000613747 67 ntBASIC18.79■□□□□ 0.6
LRRC3Q9BY71 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LRRC3Q9BY71 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 ESPNP-201ENST00000270691 2015 ntBASIC18.78■□□□□ 0.6
LRRC3Q9BY71 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC3Q9BY71 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LRRC3Q9BY71 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms