Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC25.79■■□□□ 1.72
SCAF11Q99590 AC027612.4-201ENST00000605371 583 ntBASIC25.79■■□□□ 1.72
SCAF11Q99590 AC005593.1-201ENST00000624894 515 ntBASIC25.79■■□□□ 1.72
SCAF11Q99590 AL022326.1-202ENST00000641533 845 ntBASIC25.79■■□□□ 1.72
SCAF11Q99590 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SCAF11Q99590 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC25.78■■□□□ 1.72
SCAF11Q99590 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SCAF11Q99590 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SCAF11Q99590 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SCAF11Q99590 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SCAF11Q99590 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC25.78■■□□□ 1.72
SCAF11Q99590 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC25.78■■□□□ 1.72
SCAF11Q99590 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SCAF11Q99590 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
SCAF11Q99590 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SCAF11Q99590 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SCAF11Q99590 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC25.78■■□□□ 1.72
SCAF11Q99590 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC25.78■■□□□ 1.72
SCAF11Q99590 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
SCAF11Q99590 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC25.78■■□□□ 1.72
SCAF11Q99590 AC136632.2-201ENST00000512891 861 ntBASIC25.78■■□□□ 1.72
SCAF11Q99590 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC25.77■■□□□ 1.72
SCAF11Q99590 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SCAF11Q99590 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SCAF11Q99590 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC25.77■■□□□ 1.72
SCAF11Q99590 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC25.77■■□□□ 1.72
SCAF11Q99590 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC25.77■■□□□ 1.72
SCAF11Q99590 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC25.77■■□□□ 1.72
SCAF11Q99590 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC25.77■■□□□ 1.72
SCAF11Q99590 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SCAF11Q99590 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
SCAF11Q99590 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC25.77■■□□□ 1.72
SCAF11Q99590 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SCAF11Q99590 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC25.77■■□□□ 1.72
SCAF11Q99590 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.72
SCAF11Q99590 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
SCAF11Q99590 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SCAF11Q99590 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC25.76■■□□□ 1.71
SCAF11Q99590 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC25.76■■□□□ 1.71
SCAF11Q99590 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC25.76■■□□□ 1.71
SCAF11Q99590 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC25.76■■□□□ 1.71
SCAF11Q99590 SPCS2P1-201ENST00000561636 679 ntBASIC25.76■■□□□ 1.71
SCAF11Q99590 AP002472.1-201ENST00000577490 586 ntBASIC25.76■■□□□ 1.71
SCAF11Q99590 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC25.76■■□□□ 1.71
SCAF11Q99590 AC092364.2-202ENST00000597012 1073 ntBASIC25.76■■□□□ 1.71
SCAF11Q99590 C20orf181-201ENST00000623918 480 ntBASIC25.76■■□□□ 1.71
SCAF11Q99590 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
SCAF11Q99590 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SCAF11Q99590 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC25.76■■□□□ 1.71
SCAF11Q99590 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SCAF11Q99590 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SCAF11Q99590 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC25.76■■□□□ 1.71
SCAF11Q99590 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
SCAF11Q99590 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
SCAF11Q99590 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
SCAF11Q99590 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SCAF11Q99590 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC25.75■■□□□ 1.71
SCAF11Q99590 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SCAF11Q99590 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC25.75■■□□□ 1.71
SCAF11Q99590 AC011467.4-201ENST00000594891 528 ntBASIC25.75■■□□□ 1.71
SCAF11Q99590 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC25.75■■□□□ 1.71
SCAF11Q99590 AC092865.6-201ENST00000642101 219 ntBASIC25.75■■□□□ 1.71
SCAF11Q99590 LINC00602-201ENST00000629776 2065 ntBASIC25.75■■□□□ 1.71
SCAF11Q99590 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
SCAF11Q99590 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SCAF11Q99590 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC25.75■■□□□ 1.71
SCAF11Q99590 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SCAF11Q99590 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC25.74■■□□□ 1.71
SCAF11Q99590 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC25.74■■□□□ 1.71
SCAF11Q99590 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC25.74■■□□□ 1.71
SCAF11Q99590 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC25.74■■□□□ 1.71
SCAF11Q99590 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC25.74■■□□□ 1.71
SCAF11Q99590 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
SCAF11Q99590 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC25.74■■□□□ 1.71
SCAF11Q99590 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
SCAF11Q99590 CROCCP3-202ENST00000420820 1947 ntBASIC25.74■■□□□ 1.71
SCAF11Q99590 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SCAF11Q99590 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
SCAF11Q99590 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SCAF11Q99590 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC25.74■■□□□ 1.71
SCAF11Q99590 AC097374.2-201ENST00000618617 1306 ntBASIC25.74■■□□□ 1.71
SCAF11Q99590 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SCAF11Q99590 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC25.73■■□□□ 1.71
SCAF11Q99590 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC25.73■■□□□ 1.71
SCAF11Q99590 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC25.73■■□□□ 1.71
SCAF11Q99590 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC25.73■■□□□ 1.71
SCAF11Q99590 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC25.73■■□□□ 1.71
SCAF11Q99590 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SCAF11Q99590 AL078644.1-201ENST00000609881 752 ntBASIC25.73■■□□□ 1.71
SCAF11Q99590 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
SCAF11Q99590 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
SCAF11Q99590 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SCAF11Q99590 ADK-206ENST00000541550 2222 ntTSL 2 BASIC25.73■■□□□ 1.71
SCAF11Q99590 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF11Q99590 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC25.72■■□□□ 1.71
SCAF11Q99590 MIR770-201ENST00000390219 98 ntBASIC25.72■■□□□ 1.71
SCAF11Q99590 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
SCAF11Q99590 WDR53-203ENST00000429115 683 ntTSL 2 BASIC25.72■■□□□ 1.71
SCAF11Q99590 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC25.72■■□□□ 1.71
SCAF11Q99590 MKNK2P1-201ENST00000437526 628 ntBASIC25.72■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms