Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.23■□□□□ 0.35
ITCHQ96J02 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ITCHQ96J02 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ITCHQ96J02 AC080080.1-201ENST00000625121 2420 ntBASIC17.22■□□□□ 0.35
ITCHQ96J02 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
ITCHQ96J02 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ITCHQ96J02 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ITCHQ96J02 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ITCHQ96J02 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ITCHQ96J02 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ITCHQ96J02 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ITCHQ96J02 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ITCHQ96J02 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.22■□□□□ 0.35
ITCHQ96J02 AL158047.1-201ENST00000445918 881 ntBASIC17.22■□□□□ 0.35
ITCHQ96J02 TSPY20P-201ENST00000450910 630 ntBASIC17.22■□□□□ 0.35
ITCHQ96J02 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.22■□□□□ 0.35
ITCHQ96J02 AC104390.1-201ENST00000555663 520 ntBASIC17.22■□□□□ 0.35
ITCHQ96J02 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.22■□□□□ 0.35
ITCHQ96J02 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.22■□□□□ 0.35
ITCHQ96J02 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.22■□□□□ 0.35
ITCHQ96J02 AC112497.1-201ENST00000624824 639 ntBASIC17.22■□□□□ 0.35
ITCHQ96J02 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ITCHQ96J02 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ITCHQ96J02 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ITCHQ96J02 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.22■□□□□ 0.35
ITCHQ96J02 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ITCHQ96J02 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ITCHQ96J02 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.22■□□□□ 0.35
ITCHQ96J02 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ITCHQ96J02 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ITCHQ96J02 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ITCHQ96J02 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ITCHQ96J02 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ITCHQ96J02 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ITCHQ96J02 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ITCHQ96J02 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ITCHQ96J02 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ITCHQ96J02 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ITCHQ96J02 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ITCHQ96J02 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.21■□□□□ 0.35
ITCHQ96J02 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ITCHQ96J02 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ITCHQ96J02 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.21■□□□□ 0.35
ITCHQ96J02 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.21■□□□□ 0.35
ITCHQ96J02 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.21■□□□□ 0.35
ITCHQ96J02 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ITCHQ96J02 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
ITCHQ96J02 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.21■□□□□ 0.35
ITCHQ96J02 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ITCHQ96J02 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ITCHQ96J02 AL024508.2-201ENST00000607749 1894 ntBASIC17.21■□□□□ 0.35
ITCHQ96J02 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.21■□□□□ 0.35
ITCHQ96J02 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.21■□□□□ 0.35
ITCHQ96J02 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ITCHQ96J02 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ITCHQ96J02 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ITCHQ96J02 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ITCHQ96J02 CCR12P-201ENST00000446203 998 ntBASIC17.21■□□□□ 0.35
ITCHQ96J02 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ITCHQ96J02 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.21■□□□□ 0.35
ITCHQ96J02 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.21■□□□□ 0.35
ITCHQ96J02 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.21■□□□□ 0.35
ITCHQ96J02 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.21■□□□□ 0.35
ITCHQ96J02 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
ITCHQ96J02 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ITCHQ96J02 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ITCHQ96J02 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ITCHQ96J02 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.21■□□□□ 0.35
ITCHQ96J02 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ITCHQ96J02 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.21■□□□□ 0.34
ITCHQ96J02 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
ITCHQ96J02 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ITCHQ96J02 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.2■□□□□ 0.34
ITCHQ96J02 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ITCHQ96J02 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ITCHQ96J02 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ITCHQ96J02 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.2■□□□□ 0.34
ITCHQ96J02 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
ITCHQ96J02 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
ITCHQ96J02 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ITCHQ96J02 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.2■□□□□ 0.34
ITCHQ96J02 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ITCHQ96J02 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ITCHQ96J02 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.2■□□□□ 0.34
ITCHQ96J02 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ITCHQ96J02 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.2■□□□□ 0.34
ITCHQ96J02 BX088651.1-201ENST00000540551 451 ntBASIC17.2■□□□□ 0.34
ITCHQ96J02 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.2■□□□□ 0.34
ITCHQ96J02 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.2■□□□□ 0.34
ITCHQ96J02 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ITCHQ96J02 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ITCHQ96J02 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ITCHQ96J02 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ITCHQ96J02 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ITCHQ96J02 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ITCHQ96J02 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ITCHQ96J02 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ITCHQ96J02 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.2■□□□□ 0.34
ITCHQ96J02 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ITCHQ96J02 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms