Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.08□□□□□ -0.48
ALMS1Q8TCU4 AC096734.2-201ENST00000562054 433 ntBASIC12.08□□□□□ -0.48
ALMS1Q8TCU4 AC019129.2-201ENST00000609837 1235 ntBASIC12.08□□□□□ -0.48
ALMS1Q8TCU4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC12.08□□□□□ -0.48
ALMS1Q8TCU4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
ALMS1Q8TCU4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ALMS1Q8TCU4 AL121761.2-201ENST00000598007 1648 ntBASIC12.08□□□□□ -0.48
ALMS1Q8TCU4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ALMS1Q8TCU4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC12.08□□□□□ -0.48
ALMS1Q8TCU4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ALMS1Q8TCU4 AC004461.1-201ENST00000412461 403 ntBASIC12.08□□□□□ -0.48
ALMS1Q8TCU4 AC122714.2-201ENST00000502787 707 ntBASIC12.08□□□□□ -0.48
ALMS1Q8TCU4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.08□□□□□ -0.48
ALMS1Q8TCU4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.08□□□□□ -0.48
ALMS1Q8TCU4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 AC132938.5-201ENST00000624980 1813 ntBASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 AC008667.4-201ENST00000607370 168 ntBASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 KLF4P1-201ENST00000412782 1185 ntBASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 MRPS18AP1-201ENST00000414458 589 ntBASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALMS1Q8TCU4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 CRYGEP-201ENST00000412192 528 ntBASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 FAM58DP-201ENST00000428076 619 ntBASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 RPS15P9-201ENST00000494093 319 ntBASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 AC004790.2-201ENST00000623588 572 ntBASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 SIRPAP1-201ENST00000448467 1770 ntBASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 FAM58CP-201ENST00000435741 640 ntBASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC12.06□□□□□ -0.48
ALMS1Q8TCU4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC12.05□□□□□ -0.48
ALMS1Q8TCU4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms