Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL22A1Q8NFW1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC23.93■■□□□ 1.42
COL22A1Q8NFW1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC23.93■■□□□ 1.42
COL22A1Q8NFW1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
COL22A1Q8NFW1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.93■■□□□ 1.42
COL22A1Q8NFW1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL22A1Q8NFW1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
COL22A1Q8NFW1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL22A1Q8NFW1 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL22A1Q8NFW1 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL22A1Q8NFW1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL22A1Q8NFW1 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC23.93■■□□□ 1.42
COL22A1Q8NFW1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC23.93■■□□□ 1.42
COL22A1Q8NFW1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC23.93■■□□□ 1.42
COL22A1Q8NFW1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL22A1Q8NFW1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 AP002414.1-201ENST00000391405 1147 ntBASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 AC236430.1-201ENST00000402231 743 ntBASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 AC002472.2-201ENST00000442739 958 ntBASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 AC051619.7-201ENST00000568314 623 ntBASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC23.92■■□□□ 1.42
COL22A1Q8NFW1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC23.91■■□□□ 1.42
COL22A1Q8NFW1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC23.91■■□□□ 1.42
COL22A1Q8NFW1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL22A1Q8NFW1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.91■■□□□ 1.42
COL22A1Q8NFW1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
COL22A1Q8NFW1 AC025580.3-201ENST00000617932 1424 ntBASIC23.91■■□□□ 1.42
COL22A1Q8NFW1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
COL22A1Q8NFW1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC23.91■■□□□ 1.42
COL22A1Q8NFW1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
COL22A1Q8NFW1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
COL22A1Q8NFW1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL22A1Q8NFW1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC23.91■■□□□ 1.42
COL22A1Q8NFW1 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC23.91■■□□□ 1.42
COL22A1Q8NFW1 DUT-210ENST00000559935 569 ntTSL 3 BASIC23.91■■□□□ 1.42
COL22A1Q8NFW1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC23.91■■□□□ 1.42
COL22A1Q8NFW1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC23.91■■□□□ 1.42
COL22A1Q8NFW1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 AL121761.2-201ENST00000598007 1648 ntBASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 DDT-204ENST00000404092 805 ntTSL 3 BASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 AC023141.13-201ENST00000604991 943 ntBASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 MED16-214ENST00000617672 554 ntTSL 5 BASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 AC063926.2-201ENST00000623766 1308 ntBASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
COL22A1Q8NFW1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
COL22A1Q8NFW1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL22A1Q8NFW1 GAPDHP21-201ENST00000450301 1010 ntBASIC23.89■■□□□ 1.42
COL22A1Q8NFW1 NMU-203ENST00000507338 658 ntTSL 3 BASIC23.89■■□□□ 1.42
COL22A1Q8NFW1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC23.89■■□□□ 1.42
COL22A1Q8NFW1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC23.89■■□□□ 1.42
COL22A1Q8NFW1 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC23.89■■□□□ 1.42
COL22A1Q8NFW1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC23.89■■□□□ 1.42
COL22A1Q8NFW1 AC007064.4-201ENST00000637740 555 ntBASIC23.89■■□□□ 1.42
COL22A1Q8NFW1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL22A1Q8NFW1 FUT8-AS1-201ENST00000621019 1521 ntBASIC23.89■■□□□ 1.42
COL22A1Q8NFW1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL22A1Q8NFW1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL22A1Q8NFW1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL22A1Q8NFW1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
COL22A1Q8NFW1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
COL22A1Q8NFW1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
COL22A1Q8NFW1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
COL22A1Q8NFW1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL22A1Q8NFW1 HLA-DRB6-201ENST00000411500 1235 ntBASIC23.88■■□□□ 1.41
COL22A1Q8NFW1 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC23.88■■□□□ 1.41
COL22A1Q8NFW1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC23.88■■□□□ 1.41
COL22A1Q8NFW1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL22A1Q8NFW1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC23.88■■□□□ 1.41
COL22A1Q8NFW1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC23.88■■□□□ 1.41
COL22A1Q8NFW1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms