Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NME8Q8N427 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NME8Q8N427 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.85■□□□□ 0.77
NME8Q8N427 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
NME8Q8N427 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NME8Q8N427 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NME8Q8N427 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.85■□□□□ 0.77
NME8Q8N427 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
NME8Q8N427 RBM17P3-201ENST00000417687 1192 ntBASIC19.85■□□□□ 0.77
NME8Q8N427 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NME8Q8N427 AP000347.1-202ENST00000435868 847 ntBASIC19.85■□□□□ 0.77
NME8Q8N427 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.85■□□□□ 0.77
NME8Q8N427 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
NME8Q8N427 AC112698.1-201ENST00000510299 916 ntBASIC19.85■□□□□ 0.77
NME8Q8N427 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
NME8Q8N427 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.85■□□□□ 0.77
NME8Q8N427 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
NME8Q8N427 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NME8Q8N427 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
NME8Q8N427 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
NME8Q8N427 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NME8Q8N427 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NME8Q8N427 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.85■□□□□ 0.77
NME8Q8N427 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NME8Q8N427 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
NME8Q8N427 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NME8Q8N427 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NME8Q8N427 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NME8Q8N427 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NME8Q8N427 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.84■□□□□ 0.77
NME8Q8N427 AC079776.4-201ENST00000511039 504 ntBASIC19.84■□□□□ 0.77
NME8Q8N427 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.84■□□□□ 0.77
NME8Q8N427 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NME8Q8N427 AC008608.2-201ENST00000606089 416 ntBASIC19.84■□□□□ 0.77
NME8Q8N427 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NME8Q8N427 AL355877.3-201ENST00000622820 899 ntBASIC19.84■□□□□ 0.77
NME8Q8N427 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
NME8Q8N427 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.84■□□□□ 0.77
NME8Q8N427 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.84■□□□□ 0.77
NME8Q8N427 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
NME8Q8N427 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NME8Q8N427 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NME8Q8N427 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.84■□□□□ 0.77
NME8Q8N427 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NME8Q8N427 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NME8Q8N427 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NME8Q8N427 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.83■□□□□ 0.77
NME8Q8N427 AL031598.1-201ENST00000561511 1773 ntBASIC19.83■□□□□ 0.77
NME8Q8N427 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NME8Q8N427 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NME8Q8N427 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NME8Q8N427 AL022342.1-201ENST00000400363 863 ntBASIC19.83■□□□□ 0.77
NME8Q8N427 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.83■□□□□ 0.77
NME8Q8N427 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NME8Q8N427 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
NME8Q8N427 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NME8Q8N427 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
NME8Q8N427 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.83■□□□□ 0.77
NME8Q8N427 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.83■□□□□ 0.77
NME8Q8N427 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.83■□□□□ 0.77
NME8Q8N427 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.83■□□□□ 0.77
NME8Q8N427 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.83■□□□□ 0.77
NME8Q8N427 BX640515.1-201ENST00000617215 977 ntBASIC19.83■□□□□ 0.77
NME8Q8N427 AL773604.1-201ENST00000617417 272 ntBASIC19.83■□□□□ 0.77
NME8Q8N427 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.83■□□□□ 0.77
NME8Q8N427 TP73-AS1-207ENST00000624167 988 ntBASIC19.83■□□□□ 0.77
NME8Q8N427 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NME8Q8N427 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NME8Q8N427 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NME8Q8N427 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NME8Q8N427 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NME8Q8N427 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NME8Q8N427 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
NME8Q8N427 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NME8Q8N427 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NME8Q8N427 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NME8Q8N427 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NME8Q8N427 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NME8Q8N427 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NME8Q8N427 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NME8Q8N427 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
NME8Q8N427 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
NME8Q8N427 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NME8Q8N427 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.82■□□□□ 0.76
NME8Q8N427 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NME8Q8N427 AC026471.1-201ENST00000564629 3026 ntBASIC19.82■□□□□ 0.76
NME8Q8N427 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NME8Q8N427 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.82■□□□□ 0.76
NME8Q8N427 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.82■□□□□ 0.76
NME8Q8N427 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NME8Q8N427 KRT18P67-201ENST00000432816 1264 ntBASIC19.82■□□□□ 0.76
NME8Q8N427 AF186996.4-201ENST00000467186 377 ntBASIC19.82■□□□□ 0.76
NME8Q8N427 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.82■□□□□ 0.76
NME8Q8N427 AP001005.1-201ENST00000571755 1248 ntBASIC19.82■□□□□ 0.76
NME8Q8N427 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NME8Q8N427 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NME8Q8N427 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NME8Q8N427 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NME8Q8N427 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NME8Q8N427 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms