Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
VPS13CQ709C8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS13CQ709C8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.97□□□□□ -0.01
VPS13CQ709C8 AP002472.1-201ENST00000577490 586 ntBASIC14.97□□□□□ -0.01
VPS13CQ709C8 AC138761.1-201ENST00000584393 385 ntBASIC14.97□□□□□ -0.01
VPS13CQ709C8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
VPS13CQ709C8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13CQ709C8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
VPS13CQ709C8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13CQ709C8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13CQ709C8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13CQ709C8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
VPS13CQ709C8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS13CQ709C8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC14.97□□□□□ -0.01
VPS13CQ709C8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VPS13CQ709C8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
VPS13CQ709C8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS13CQ709C8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.96□□□□□ -0.01
VPS13CQ709C8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13CQ709C8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13CQ709C8 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.96□□□□□ -0.01
VPS13CQ709C8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.96□□□□□ -0.01
VPS13CQ709C8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.96□□□□□ -0.01
VPS13CQ709C8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13CQ709C8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.96□□□□□ -0.01
VPS13CQ709C8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.96□□□□□ -0.01
VPS13CQ709C8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13CQ709C8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
VPS13CQ709C8 AD001527.2-201ENST00000622994 785 ntBASIC14.96□□□□□ -0.01
VPS13CQ709C8 AC093028.1-201ENST00000622998 982 ntBASIC14.96□□□□□ -0.01
VPS13CQ709C8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.96□□□□□ -0.01
VPS13CQ709C8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
VPS13CQ709C8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13CQ709C8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13CQ709C8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13CQ709C8 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13CQ709C8 KRT18P28-201ENST00000453838 1332 ntBASIC14.96□□□□□ -0.01
VPS13CQ709C8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
VPS13CQ709C8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13CQ709C8 AC009102.3-201ENST00000623118 1491 ntBASIC14.96□□□□□ -0.01
VPS13CQ709C8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13CQ709C8 MIR149-201ENST00000384879 89 ntBASIC14.96□□□□□ -0.01
VPS13CQ709C8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13CQ709C8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.96□□□□□ -0.01
VPS13CQ709C8 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.96□□□□□ -0.01
VPS13CQ709C8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.96□□□□□ -0.01
VPS13CQ709C8 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.96□□□□□ -0.01
VPS13CQ709C8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.96□□□□□ -0.01
VPS13CQ709C8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13CQ709C8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VPS13CQ709C8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
VPS13CQ709C8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VPS13CQ709C8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
VPS13CQ709C8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
VPS13CQ709C8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.96□□□□□ -0.02
VPS13CQ709C8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.02
VPS13CQ709C8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
VPS13CQ709C8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13CQ709C8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13CQ709C8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.95□□□□□ -0.02
VPS13CQ709C8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.95□□□□□ -0.02
VPS13CQ709C8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13CQ709C8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13CQ709C8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13CQ709C8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13CQ709C8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
VPS13CQ709C8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
VPS13CQ709C8 AC092364.2-202ENST00000597012 1073 ntBASIC14.95□□□□□ -0.02
VPS13CQ709C8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13CQ709C8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS13CQ709C8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
VPS13CQ709C8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13CQ709C8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
VPS13CQ709C8 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS13CQ709C8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.95□□□□□ -0.02
VPS13CQ709C8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.95□□□□□ -0.02
VPS13CQ709C8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.95□□□□□ -0.02
VPS13CQ709C8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13CQ709C8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS13CQ709C8 AC005829.1-201ENST00000570002 483 ntBASIC14.95□□□□□ -0.02
VPS13CQ709C8 AC009154.2-201ENST00000621177 724 ntBASIC14.95□□□□□ -0.02
VPS13CQ709C8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13CQ709C8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
VPS13CQ709C8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13CQ709C8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
VPS13CQ709C8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13CQ709C8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.95□□□□□ -0.02
VPS13CQ709C8 AC105339.3-201ENST00000560043 636 ntBASIC14.95□□□□□ -0.02
VPS13CQ709C8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.95□□□□□ -0.02
VPS13CQ709C8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.95□□□□□ -0.02
VPS13CQ709C8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VPS13CQ709C8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13CQ709C8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13CQ709C8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13CQ709C8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS13CQ709C8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13CQ709C8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13CQ709C8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS13CQ709C8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS13CQ709C8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms