Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
SNAPC4Q5SXM2 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SNAPC4Q5SXM2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC29.32■■■□□ 2.28
SNAPC4Q5SXM2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC29.32■■■□□ 2.28
SNAPC4Q5SXM2 AC069262.1-201ENST00000539058 672 ntBASIC29.32■■■□□ 2.28
SNAPC4Q5SXM2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
SNAPC4Q5SXM2 OR7E47P-204ENST00000575924 449 ntBASIC29.32■■■□□ 2.28
SNAPC4Q5SXM2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
SNAPC4Q5SXM2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SNAPC4Q5SXM2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SNAPC4Q5SXM2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC29.32■■■□□ 2.28
SNAPC4Q5SXM2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC29.32■■■□□ 2.28
SNAPC4Q5SXM2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 MRPL20P1-201ENST00000400819 433 ntBASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 AC190387.1-201ENST00000551683 408 ntBASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 AC096734.2-201ENST00000562054 433 ntBASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 AC004449.1-201ENST00000564240 433 ntBASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 AL158211.5-201ENST00000623583 2518 ntBASIC29.31■■■□□ 2.28
SNAPC4Q5SXM2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SNAPC4Q5SXM2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
SNAPC4Q5SXM2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC29.3■■■□□ 2.28
SNAPC4Q5SXM2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
SNAPC4Q5SXM2 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
SNAPC4Q5SXM2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC29.3■■■□□ 2.28
SNAPC4Q5SXM2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC29.3■■■□□ 2.28
SNAPC4Q5SXM2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC29.3■■■□□ 2.28
SNAPC4Q5SXM2 AC105339.1-204ENST00000636249 355 ntBASIC29.3■■■□□ 2.28
SNAPC4Q5SXM2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SNAPC4Q5SXM2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SNAPC4Q5SXM2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
SNAPC4Q5SXM2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
SNAPC4Q5SXM2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC29.3■■■□□ 2.28
SNAPC4Q5SXM2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
SNAPC4Q5SXM2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SNAPC4Q5SXM2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SNAPC4Q5SXM2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
SNAPC4Q5SXM2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SNAPC4Q5SXM2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 AC015922.1-201ENST00000421102 1152 ntBASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 AL020989.1-201ENST00000422979 469 ntBASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 AL353593.2-201ENST00000602529 1483 ntBASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC29.29■■■□□ 2.28
SNAPC4Q5SXM2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SNAPC4Q5SXM2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SNAPC4Q5SXM2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SNAPC4Q5SXM2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SNAPC4Q5SXM2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
SNAPC4Q5SXM2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SNAPC4Q5SXM2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
SNAPC4Q5SXM2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SNAPC4Q5SXM2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC29.28■■■□□ 2.28
SNAPC4Q5SXM2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC29.28■■■□□ 2.28
SNAPC4Q5SXM2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC29.28■■■□□ 2.28
SNAPC4Q5SXM2 TBC1D3P5-201ENST00000579401 1545 ntBASIC29.28■■■□□ 2.28
SNAPC4Q5SXM2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
SNAPC4Q5SXM2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
SNAPC4Q5SXM2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC29.27■■■□□ 2.28
SNAPC4Q5SXM2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
SNAPC4Q5SXM2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
SNAPC4Q5SXM2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
SNAPC4Q5SXM2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
SNAPC4Q5SXM2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
SNAPC4Q5SXM2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC29.27■■■□□ 2.28
SNAPC4Q5SXM2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC29.27■■■□□ 2.28
SNAPC4Q5SXM2 AQP6-203ENST00000551733 849 ntTSL 3 BASIC29.27■■■□□ 2.28
SNAPC4Q5SXM2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
SNAPC4Q5SXM2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC29.27■■■□□ 2.28
SNAPC4Q5SXM2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms