Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VARS2Q5ST30 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VARS2Q5ST30 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VARS2Q5ST30 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VARS2Q5ST30 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.06■□□□□ 0.64
VARS2Q5ST30 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.06■□□□□ 0.64
VARS2Q5ST30 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.06■□□□□ 0.64
VARS2Q5ST30 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
VARS2Q5ST30 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
VARS2Q5ST30 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
VARS2Q5ST30 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.06■□□□□ 0.64
VARS2Q5ST30 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.06■□□□□ 0.64
VARS2Q5ST30 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
VARS2Q5ST30 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 AP001005.1-201ENST00000571755 1248 ntBASIC19.06■□□□□ 0.64
VARS2Q5ST30 AKR1B10P2-201ENST00000577332 927 ntBASIC19.06■□□□□ 0.64
VARS2Q5ST30 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.06■□□□□ 0.64
VARS2Q5ST30 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
VARS2Q5ST30 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.06■□□□□ 0.64
VARS2Q5ST30 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
VARS2Q5ST30 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VARS2Q5ST30 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VARS2Q5ST30 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
VARS2Q5ST30 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VARS2Q5ST30 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.05■□□□□ 0.64
VARS2Q5ST30 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
VARS2Q5ST30 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VARS2Q5ST30 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VARS2Q5ST30 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.05■□□□□ 0.64
VARS2Q5ST30 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.05■□□□□ 0.64
VARS2Q5ST30 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VARS2Q5ST30 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VARS2Q5ST30 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.05■□□□□ 0.64
VARS2Q5ST30 AF186996.4-201ENST00000467186 377 ntBASIC19.05■□□□□ 0.64
VARS2Q5ST30 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.05■□□□□ 0.64
VARS2Q5ST30 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.05■□□□□ 0.64
VARS2Q5ST30 AC006213.4-201ENST00000616184 634 ntBASIC19.05■□□□□ 0.64
VARS2Q5ST30 AC148477.8-201ENST00000624298 468 ntBASIC19.05■□□□□ 0.64
VARS2Q5ST30 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
VARS2Q5ST30 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
VARS2Q5ST30 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.05■□□□□ 0.64
VARS2Q5ST30 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VARS2Q5ST30 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.05■□□□□ 0.64
VARS2Q5ST30 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.05■□□□□ 0.64
VARS2Q5ST30 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
VARS2Q5ST30 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VARS2Q5ST30 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
VARS2Q5ST30 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VARS2Q5ST30 WIZP1-201ENST00000531444 2299 ntBASIC19.04■□□□□ 0.64
VARS2Q5ST30 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VARS2Q5ST30 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.04■□□□□ 0.64
VARS2Q5ST30 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.04■□□□□ 0.64
VARS2Q5ST30 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VARS2Q5ST30 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VARS2Q5ST30 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VARS2Q5ST30 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.04■□□□□ 0.64
VARS2Q5ST30 KRT18P13-201ENST00000400056 1290 ntBASIC19.04■□□□□ 0.64
VARS2Q5ST30 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.04■□□□□ 0.64
VARS2Q5ST30 ABCD1P5-201ENST00000445663 754 ntBASIC19.04■□□□□ 0.64
VARS2Q5ST30 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC19.04■□□□□ 0.64
VARS2Q5ST30 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC19.04■□□□□ 0.64
VARS2Q5ST30 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
VARS2Q5ST30 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.04■□□□□ 0.64
VARS2Q5ST30 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.04■□□□□ 0.64
VARS2Q5ST30 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VARS2Q5ST30 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.04■□□□□ 0.64
VARS2Q5ST30 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.04■□□□□ 0.64
VARS2Q5ST30 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.04■□□□□ 0.64
VARS2Q5ST30 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VARS2Q5ST30 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VARS2Q5ST30 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VARS2Q5ST30 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.04■□□□□ 0.64
VARS2Q5ST30 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.04■□□□□ 0.64
VARS2Q5ST30 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VARS2Q5ST30 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.04■□□□□ 0.64
VARS2Q5ST30 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.04■□□□□ 0.64
VARS2Q5ST30 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.04■□□□□ 0.64
VARS2Q5ST30 AC018445.3-201ENST00000624177 1945 ntBASIC19.04■□□□□ 0.64
VARS2Q5ST30 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms