Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRK2Q5S007 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRK2Q5S007 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRK2Q5S007 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRK2Q5S007 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRK2Q5S007 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRK2Q5S007 AC107890.1-201ENST00000422478 521 ntBASIC15.56■□□□□ 0.08
LRRK2Q5S007 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
LRRK2Q5S007 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.56■□□□□ 0.08
LRRK2Q5S007 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
LRRK2Q5S007 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.56■□□□□ 0.08
LRRK2Q5S007 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.56■□□□□ 0.08
LRRK2Q5S007 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRK2Q5S007 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRK2Q5S007 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.56■□□□□ 0.08
LRRK2Q5S007 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRK2Q5S007 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRK2Q5S007 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRK2Q5S007 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LRRK2Q5S007 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRK2Q5S007 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRK2Q5S007 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRK2Q5S007 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRK2Q5S007 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRK2Q5S007 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRK2Q5S007 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.55■□□□□ 0.08
LRRK2Q5S007 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.55■□□□□ 0.08
LRRK2Q5S007 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRK2Q5S007 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.55■□□□□ 0.08
LRRK2Q5S007 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.55■□□□□ 0.08
LRRK2Q5S007 SPDYE22P-201ENST00000582158 798 ntBASIC15.55■□□□□ 0.08
LRRK2Q5S007 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRK2Q5S007 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRK2Q5S007 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRK2Q5S007 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.55■□□□□ 0.08
LRRK2Q5S007 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRK2Q5S007 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRK2Q5S007 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRK2Q5S007 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRK2Q5S007 MIR149-201ENST00000384879 89 ntBASIC15.55■□□□□ 0.08
LRRK2Q5S007 DDX43P3-201ENST00000441064 443 ntBASIC15.55■□□□□ 0.08
LRRK2Q5S007 RN7SL692P-201ENST00000464677 288 ntBASIC15.55■□□□□ 0.08
LRRK2Q5S007 AC112698.1-201ENST00000510299 916 ntBASIC15.55■□□□□ 0.08
LRRK2Q5S007 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRK2Q5S007 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LRRK2Q5S007 AP001059.3-201ENST00000619053 235 ntBASIC15.55■□□□□ 0.08
LRRK2Q5S007 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRK2Q5S007 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRK2Q5S007 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRK2Q5S007 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 SDHAP2-201ENST00000455183 2001 ntBASIC15.54■□□□□ 0.08
LRRK2Q5S007 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRK2Q5S007 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 AC007967.3-201ENST00000434308 558 ntBASIC15.54■□□□□ 0.08
LRRK2Q5S007 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRK2Q5S007 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRK2Q5S007 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRK2Q5S007 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRK2Q5S007 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRK2Q5S007 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRK2Q5S007 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.54■□□□□ 0.08
LRRK2Q5S007 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.54■□□□□ 0.08
LRRK2Q5S007 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRK2Q5S007 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRK2Q5S007 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRK2Q5S007 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRK2Q5S007 MIR943-201ENST00000401286 94 ntBASIC15.54■□□□□ 0.08
LRRK2Q5S007 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.54■□□□□ 0.08
LRRK2Q5S007 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 TIMM8BP1-201ENST00000452384 211 ntBASIC15.54■□□□□ 0.08
LRRK2Q5S007 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRK2Q5S007 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRK2Q5S007 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRK2Q5S007 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LRRK2Q5S007 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRK2Q5S007 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.53■□□□□ 0.08
LRRK2Q5S007 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRK2Q5S007 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRK2Q5S007 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRK2Q5S007 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms